Pm002685 (Prunus mume)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Pm002685 T201954_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pm002685 GRAS 377 748

Links

Other GRAS family TFs
Other Prunus mume TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PRUPE_ppa001883mg Prunus persica PRUPE_ppa001883mg N 0.989
gene18433-v1.0-hybrid Fragaria vesca gene18433-v1.0-hybrid N 0.826
orange1.1g004514m.g Citrus sinensis orange1.1g004514m.g N 0.822
Ciclev10011141m.g Citrus clementina Ciclev10011141m.g N 0.819
SapurV1A.0001s1700 Salix purpurea SapurV1A.0001s1700 N 0.811
Cucsa.175500 Cucumis sativus Cucsa.175500 N 0.805
POPTR_0006s08690 Populus trichocarpa POPTR_0006s08690 N 0.803
GLYMA03G10320 Glycine max GLYMA03G10320 N 0.800
Cla018179 Citrullus lanatus Cla018179 N 0.800
Ca_21138 Cicer arietinum Ca_21138 N 0.792
VIT_08s0007g00510 Vitis vinifera VIT_08s0007g00510 N 0.792
MTR_7g062120 Medicago truncatula MTR_7g062120 N 0.789
Eucgr.A01279 Eucalyptus grandis Eucgr.A01279 N 0.786
PK20526.1 Cannabis sativa PK20526.1 N 0.786
TCM_021920 Theobroma cacao TCM_021920 N 0.784
cassava2361.valid.m1 Manihot esculenta cassava2361.valid.m1 N 0.784
PGSC0003DMG400008904 Solanum tuberosum PGSC0003DMG400008904 N 0.781
Solyc09g010920.1 Solanum lycopersicum Solyc09g010920.1 N 0.781
Lus10024384.g Linum usitatissimum Lus10024384.g N 0.781
GLYMA07G15950 Glycine max GLYMA07G15950 N 0.778
PGSC0003DMG400019200 Solanum tuberosum PGSC0003DMG400019200 N 0.776
GLYMA18G39920 Glycine max GLYMA18G39920 N 0.775
29767.m000200 Ricinus communis 29767.m000200 N 0.775
Gorai.011G266200 Gossypium raimondii Gorai.011G266200 N 0.762
Solyc10g086530.1 Solanum lycopersicum Solyc10g086530.1 N 0.751
mgf011165m Mimulus guttatus mgf011165m N 0.751
orange1.1g004488m.g Citrus sinensis orange1.1g004488m.g N 0.751
Ciclev10030787m.g Citrus clementina Ciclev10030787m.g N 0.749
Aquca_009_00954 Aquilegia coerulea Aquca_009_00954 N 0.746
27568.m000253 Ricinus communis 27568.m000253 N 0.743
TCM_042705 Theobroma cacao TCM_042705 N 0.743
SapurV1A.0451s0060 Salix purpurea SapurV1A.0451s0060 N 0.741
Gorai.007G376400 Gossypium raimondii Gorai.007G376400 N 0.735
cassava31335.valid.m1 Manihot esculenta cassava31335.valid.m1 N 0.735
POPTR_0008s05750 Populus trichocarpa POPTR_0008s05750 N 0.730
Bostr.23794s0312 Boechera stricta Bostr.23794s0312 N 0.730
SCL9 Arabidopsis thaliana AT2G37650 N 0.730
Thhalv10016318m.g Eutrema salsugineum Thhalv10016318m.g N 0.727
Bra000012 Brassica rapa Bra000012 N 0.727
Bo3g031890 Brassica oleracea Bo3g031890 N 0.724
Cagra.18121s0006 Capsella grandiflora Cagra.18121s0006 N 0.723
Carubv10025657m.g Capsella rubella Carubv10025657m.g N 0.723
Si034417m.g Setaria italica Si034417m.g N 0.722
GRMZM2G098784 Zea mays GRMZM2G098784 N 0.719
Gorai.010G201000 Gossypium raimondii Gorai.010G201000 N 0.719
OGLUM03G30480 Oryza glumaepatula OGLUM03G30480 N 0.716
ONIVA03G31510 Oryza nivara ONIVA03G31510 N 0.716
GRMZM2G049159 Zea mays GRMZM2G049159 N 0.716
ORGLA03G0287000 Oryza glaberrima ORGLA03G0287000 N 0.716
OBART03G30260 Oryza barthii OBART03G30260 N 0.716
OPUNC03G27510 Oryza punctata OPUNC03G27510 N 0.716
OMERI03G26460 Oryza meridionalis OMERI03G26460 N 0.716
evm.TU.supercontig_1.422 Carica papaya evm.TU.supercontig_1.422 N 0.714
BGIOSGA010017 Oryza indica BGIOSGA010017 N 0.714
Lus10023404.g Linum usitatissimum Lus10023404.g N 0.714
OS03G0690600 Oryza sativa OS03G0690600 N 0.714
Sb01g039670 Sorghum bicolor Sb01g039670 N 0.711
OB03G37330 Oryza brachyantha OB03G37330 N 0.711
Pavir.J32327 Panicum virgatum Pavir.J32327 N 0.711
OLONG_013585 Oryza longistaminata OLONG_013585 N 0.710
Pavir.Ia03770 Panicum virgatum Pavir.Ia03770 N 0.708
cassava15723.m1 Manihot esculenta cassava15723.m1 N 0.708
LPERR03G24920 Leersia perrieri LPERR03G24920 N 0.708
fgenesh1_pg.C_scaffold_4001848 Arabidopsis lyrata fgenesh1_pg.C_scaffold_4001848 N 0.707
Pm018822 Prunus mume Pm018822 N 0.705
PRUPE_ppa021438mg Prunus persica PRUPE_ppa021438mg N 0.705
mgf014897m Mimulus guttatus mgf014897m N 0.703
Traes_5AL_9AE0ED26A Triticum aestivum Traes_5AL_9AE0ED26A N 0.703
Eucgr.K03128 Eucalyptus grandis Eucgr.K03128 N 0.703
Lus10040284.g Linum usitatissimum Lus10040284.g N 0.703
Traes_4DS_050789E2A Triticum aestivum Traes_4DS_050789E2A N 0.700