Pm014329 (Prunus mume)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Pm014329 T201968_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RGL2
M02031_2.00 		Arabidopsis thaliana
NGTACGGHN
NDCCGTACN		 PBM
Weirauch et al.(2014)
pTH8681 		0.718 0.718
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm014329 GRAS 228 588

Links

Other GRAS family TFs
Other Prunus mume TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa003206mg Prunus persica PRUPE_ppa003206mg I 0.989
MDP0000669451 Malus domestica MDP0000669451 I 0.950
VIT_14s0006g00640 Vitis vinifera VIT_14s0006g00640 I 0.897
Ciclev10011367m.g Citrus clementina Ciclev10011367m.g N 0.886
TCM_019165 Theobroma cacao TCM_019165 N 0.886
cassava6237.valid.m1 Manihot esculenta cassava6237.valid.m1 I 0.883
orange1.1g008153m.g Citrus sinensis orange1.1g008153m.g N 0.883
Eucgr.J01594 Eucalyptus grandis Eucgr.J01594 I 0.878
POPTR_0004s08890 Populus trichocarpa POPTR_0004s08890 I 0.877
POPTR_0005s14540 Populus trichocarpa POPTR_0005s14540 I 0.875
28677.m000055 Ricinus communis 28677.m000055 N 0.874
evm.TU.supercontig_116.43 Carica papaya evm.TU.supercontig_116.43 I 0.867
GLYMA18G04500 Glycine max GLYMA18G04500 I 0.863
Lus10017626.g Linum usitatissimum Lus10017626.g N 0.860
GLYMA11G33720 Glycine max GLYMA11G33720 I 0.858
Lus10033583.g Linum usitatissimum Lus10033583.g N 0.858
Lus10009133.g Linum usitatissimum Lus10009133.g N 0.851
Gorai.001G089400 Gossypium raimondii Gorai.001G089400 I 0.847
Solyc11g011260.1 Solanum lycopersicum Solyc11g011260.1 N 0.844
PGSC0003DMG400015692 Solanum tuberosum PGSC0003DMG400015692 N 0.844
Cla020062 Citrullus lanatus Cla020062 N 0.838
SapurV1A.0102s0220 Salix purpurea SapurV1A.0102s0220 N 0.830
29692.m000540 Ricinus communis 29692.m000540 N 0.824
POPTR_0008s13090 Populus trichocarpa POPTR_0008s13090 N 0.821
GAI1 Vitis vinifera VIT_01s0011g05260 N 0.821
cassava15077.m1 Manihot esculenta cassava15077.m1 N 0.821
Cucsa.006260 Cucumis sativus Cucsa.006260 N 0.821
LjT40K11.90.nc Lotus japonicus LjT40K11.90.nc N 0.819
LjT15P09.140.nc Lotus japonicus LjT15P09.140.nc N 0.819
MTR_3g065980 Medicago truncatula MTR_3g065980 N 0.819
POPTR_0010s12080 Populus trichocarpa POPTR_0010s12080 N 0.816
PK14700.1 Cannabis sativa PK14700.1 N 0.815
TCM_010965 Theobroma cacao TCM_010965 N 0.812
SapurV1A.0015s0210 Salix purpurea SapurV1A.0015s0210 N 0.812
SapurV1A.0405s0090 Salix purpurea SapurV1A.0405s0090 N 0.807
cassava14484.m1 Manihot esculenta cassava14484.m1 N 0.807
evm.TU.supercontig_2.240 Carica papaya evm.TU.supercontig_2.240 I 0.807
Ca_13295 Cicer arietinum Ca_13295 I 0.800
Gorai.002G177000 Gossypium raimondii Gorai.002G177000 N 0.799
Pm006304 Prunus mume Pm006304 N 0.796
AMTR_s00010p00148880 Amborella trichopoda AMTR_s00010p00148880 N 0.793
Cla003996 Citrullus lanatus Cla003996 N 0.790
PRUPE_ppa005944mg Prunus persica PRUPE_ppa005944mg N 0.790
Cucsa.280310 Cucumis sativus Cucsa.280310 N 0.785
mgf008289m Mimulus guttatus mgf008289m N 0.783
Eucgr.G02163 Eucalyptus grandis Eucgr.G02163 N 0.777
Ca_05046 Cicer arietinum Ca_05046 N 0.771
Aquca_091_00032 Aquilegia coerulea Aquca_091_00032 N 0.770
Cagra.2235s0013 Capsella grandiflora Cagra.2235s0013 N 0.768
Bostr.7903s0021 Boechera stricta Bostr.7903s0021 N 0.768
MDP0000237978 Malus domestica MDP0000237978 N 0.768
Thhalv10005482m.g Eutrema salsugineum Thhalv10005482m.g N 0.763
GLYMA08G10140 Glycine max GLYMA08G10140 N 0.761
RGL2 Arabidopsis lyrata fgenesh2_kg.3__292__AT3G03450.1 I 0.760
Carubv10008833m.g Capsella rubella Carubv10008833m.g N 0.759
RGA1 Arabidopsis lyrata fgenesh2_kg.5__65__AT2G01570.1 N 0.757
RGA Arabidopsis thaliana AT2G01570 N 0.757
Bo7g078550 Brassica oleracea Bo7g078550 N 0.757
Bra024875 Brassica rapa Bra024875 N 0.757
Bostr.7128s0107 Boechera stricta Bostr.7128s0107 N 0.757
Cagra.3501s0003 Capsella grandiflora Cagra.3501s0003 N 0.757
GAI Arabidopsis thaliana AT1G14920 N 0.754
GLYMA05G27190 Glycine max GLYMA05G27190 N 0.754
Traes_4AL_77F4CC833 Triticum aestivum Traes_4AL_77F4CC833 N 0.753
Thhalv10007323m.g Eutrema salsugineum Thhalv10007323m.g N 0.753
orange1.1g043131m.g Citrus sinensis orange1.1g043131m.g N 0.751
GAI Arabidopsis lyrata fgenesh2_kg.1__1634__AT1G14920.1 N 0.751
Aquca_002_01300 Aquilegia coerulea Aquca_002_01300 N 0.747
Ciclev10017466m.g Citrus clementina Ciclev10017466m.g N 0.747
Carubv10018534m.g Capsella rubella Carubv10018534m.g N 0.747
Thhalv10015535m.g Eutrema salsugineum Thhalv10015535m.g I 0.743
F775_03572 Aegilops tauschii F775_03572 N 0.741
SLR1 Oryza sativa OS03G0707600 N 0.729
Pavir.Ib04357 Panicum virgatum Pavir.Ib04357 N 0.726
Pavir.Ia00840 Panicum virgatum Pavir.Ia00840 N 0.726
Carubv10020171m.g Capsella rubella Carubv10020171m.g N 0.724
AMTR_s00012p00140480 Amborella trichopoda AMTR_s00012p00140480 N 0.724
Thhalv10018436m.g Eutrema salsugineum Thhalv10018436m.g N 0.723
BRADI1G11090 Brachypodium distachyon BRADI1G11090 N 0.723
MLOC_67940 Hordeum vulgare MLOC_67940 N 0.723
RGL1 Arabidopsis lyrata fgenesh2_kg.2__868__AT1G66350.1 N 0.722
ONIVA03G32670 Oryza nivara ONIVA03G32670 N 0.721
Sb01g010660 Sorghum bicolor Sb01g010660 N 0.721
OBART03G31370 Oryza barthii OBART03G31370 N 0.721
OMERI03G27970 Oryza meridionalis OMERI03G27970 N 0.721
SLR1 Oryza indica BGIOSGA013420 N 0.721
ORGLA03G0290200 Oryza glaberrima ORGLA03G0290200 N 0.721
ORUFI03G32650 Oryza rufipogon ORUFI03G32650 N 0.718
Bostr.19046s0061 Boechera stricta Bostr.19046s0061 I 0.718
LPERR03G26000 Leersia perrieri LPERR03G26000 N 0.718
OGLUM03G31610 Oryza glumaepatula OGLUM03G31610 N 0.718
mgf025772m Mimulus guttatus mgf025772m N 0.718
OPUNC03G28530 Oryza punctata OPUNC03G28530 N 0.718
GRMZM2G144744 Zea mays GRMZM2G144744 N 0.717
Traes_4BS_2EE4988CD Triticum aestivum Traes_4BS_2EE4988CD N 0.717
Si039400m.g Setaria italica Si039400m.g N 0.716
Cagra.2098s0043 Capsella grandiflora Cagra.2098s0043 I 0.715
Traes_4DS_ADBA6E30A Triticum aestivum Traes_4DS_ADBA6E30A N 0.715
OB03G38380 Oryza brachyantha OB03G38380 N 0.713
Carubv10015212m.g Capsella rubella Carubv10015212m.g I 0.713
Cagra.0463s0002 Capsella grandiflora Cagra.0463s0002 N 0.712
Bo2g052880 Brassica oleracea Bo2g052880 N 0.710
GRMZM2G024973 Zea mays GRMZM2G024973 N 0.708
RGL1 Arabidopsis thaliana AT1G66350 N 0.707
Bo5g149920 Brassica oleracea Bo5g149920 I 0.707
RGL2 Arabidopsis thaliana AT3G03450 D 0.706
Thhalv10020431m.g Eutrema salsugineum Thhalv10020431m.g I 0.705
Bostr.26959s0284 Boechera stricta Bostr.26959s0284 N 0.704
Bo9g160170 Brassica oleracea Bo9g160170 I 0.704
Bra039762 Brassica rapa Bra039762 N 0.703
Bra013973 Brassica rapa Bra013973 I 0.701