CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm017821
(
Prunus mume
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Pm017821
T201975_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm017821
GRAS
277
636
AIDQLFNAAELIETGNPALAQGILARLNHQLSPIGKPFQRAAFYFKEALQLLLHINTSSNSSNALSPFSLIFKIGAYKSFSEISPVLQFANFTCNQAILEAVEGFNRVHVIDFDIGYGGQWASFMQEIALRNCGAPSFKITAFISSSTHDEFEIGFTRENLKHFASELNLSFELELVSLEALNSGSWGLPLHVSEGVAVAVNLPIGSFSNNPLSLTMALGFVKQLSPKIVVSLDRGSDRTDVPFAHQVIQALHSYSGLLESLDAVNVNPDALQKIERYLLQPGIEKIVTGRHLSPKRTPPWRTLFSSSGFSPLTFSNFTESQAECLVQRTPVGGFHIEKRQSSLVLCWQRKDLISVSVWR
Links
Other
GRAS
family TFs
Other
Prunus mume
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa001781mg
Prunus persica
PRUPE_ppa001781mg
N
0.983
MDP0000784909
Malus domestica
MDP0000784909
N
0.844
gene03956-v1.0-hybrid
Fragaria vesca
gene03956-v1.0-hybrid
N
0.808
Ciclev10019094m.g
Citrus clementina
Ciclev10019094m.g
N
0.727
orange1.1g005326m.g
Citrus sinensis
orange1.1g005326m.g
N
0.727
PK17954.1
Cannabis sativa
PK17954.1
N
0.714
VIT_15s0048g00270
Vitis vinifera
VIT_15s0048g00270
N
0.711
PGSC0003DMG400025973
Solanum tuberosum
PGSC0003DMG400025973
N
0.708
TCM_005571
Theobroma cacao
TCM_005571
N
0.704
Solyc01g090950.2
Solanum lycopersicum
Solyc01g090950.2
N
0.703