CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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28650.m000189
(
Ricinus communis
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
28650.m000189
T201998_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
28650.m000189
GRAS
288
658
LSTLLIQCAQATGTGDQRTAYQQLKLIRLHASPYGDANQRLAHYFANALEARLAGSGKLMPTLFIGPSTNTADILKAYQLYVSVCPFRKMSNFFTNRTITKAVEKATRLHIIDFGISYGFQWPCFIYHLSTRPGGPPKVRITGIDYPQPGFRPGERVEETGRRLKRLADKLNVPFEYNAIAQKWETIQGEDLQIDKDEVVAVCCMNRLKNLPDDTIVLDSPRDAVLRLIKSINPVIFLHGVVNGSYNAPFFATRFREALFHFSSLFDMFEAIATREDQERLVFERELIGKDVMNVVACEGSERFERPETYKQWQIRNSRIGFRQLPLHQDIVKRVRNIKNDYHKDFAVDEDGHWMLMGWKGRIIHAISAWK
Links
Other
GRAS
family TFs
Other
Ricinus communis
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava34371.m1
Manihot esculenta
cassava34371.m1
N
0.818
POPTR_0001s24880
Populus trichocarpa
POPTR_0001s24880
N
0.729
POPTR_0009s03830
Populus trichocarpa
POPTR_0009s03830
N
0.729
SapurV1A.0041s0190
Salix purpurea
SapurV1A.0041s0190
N
0.724
SapurV1A.0040s0500
Salix purpurea
SapurV1A.0040s0500
N
0.710
SapurV1A.0040s0510
Salix purpurea
SapurV1A.0040s0510
N
0.710
SapurV1A.0040s0520
Salix purpurea
SapurV1A.0040s0520
N
0.709