CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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28650.m000191
(
Ricinus communis
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
28650.m000191
T202000_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
28650.m000191
GRAS
391
762
LRTLLILCAQAVSSDDRRTANEILKQIRQHSSPFGDGSQRLAHCFANGLEARLAGTGAQIYTALSSEKLSAADMLKAYLAYISACPFNKIAIIFANHNILAVSKNASTLHIIDFGILYGFQWPALIYRLSKREGGPPKLRITGIELPQSGFRPGERVQETGRRLAKYCELHKVPFEYNAIAKKWETIQIDDLKLNHGEVVAVNCLFRSKNLLDETVVVNSPRNAVLNLIRKMSPDIFIHAIVNGSYSAPFFVTRFRESLFHFSALFDMFDTNMSREDQMRLKFEKEFYGREALNVIACEGSERVERPETYKQWQVRSLRAGLKQLPLEPQLLKKLKCRVKEGYHNDFVVDQDGQWMLQGWKGRIIYASSAWV
Links
Other
GRAS
family TFs
Other
Ricinus communis
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava19450.valid.m1
Manihot esculenta
cassava19450.valid.m1
N
0.897
POPTR_0009s03790
Populus trichocarpa
POPTR_0009s03790
N
0.843
SapurV1A.0041s0160
Salix purpurea
SapurV1A.0041s0160
N
0.838
POPTR_0001s24850
Populus trichocarpa
POPTR_0001s24850
N
0.827
SapurV1A.4599s0010
Salix purpurea
SapurV1A.4599s0010
N
0.827
SapurV1A.0040s0470
Salix purpurea
SapurV1A.0040s0470
N
0.822
Pm000719
Prunus mume
Pm000719
N
0.800
PRUPE_ppa003149mg
Prunus persica
PRUPE_ppa003149mg
N
0.797
Lus10016521.g
Linum usitatissimum
Lus10016521.g
N
0.795
Lus10040790.g
Linum usitatissimum
Lus10040790.g
N
0.789
evm.TU.supercontig_81.126
Carica papaya
evm.TU.supercontig_81.126
N
0.770
evm.TU.supercontig_81.124
Carica papaya
evm.TU.supercontig_81.124
N
0.768
TCM_041815
Theobroma cacao
TCM_041815
N
0.738
Bo01118s010
Brassica oleracea
Bo01118s010
N
0.735
Thhalv10006868m.g
Eutrema salsugineum
Thhalv10006868m.g
N
0.735
Bostr.25219s0207
Boechera stricta
Bostr.25219s0207
N
0.730
Bra030688
Brassica rapa
Bra030688
N
0.730
SCL14
Arabidopsis thaliana
AT1G07530
N
0.724
VIT_06s0004g04950
Vitis vinifera
VIT_06s0004g04950
N
0.722
GLYMA12G06670
Glycine max
GLYMA12G06670
N
0.722
Ca_16678
Cicer arietinum
Ca_16678
N
0.719
Gorai.001G111500
Gossypium raimondii
Gorai.001G111500
N
0.719
Carubv10008391m.g
Capsella rubella
Carubv10008391m.g
N
0.716
Ciclev10027848m.g
Citrus clementina
Ciclev10027848m.g
N
0.716
Gorai.003G130600
Gossypium raimondii
Gorai.003G130600
N
0.716
Cagra.1671s0373
Capsella grandiflora
Cagra.1671s0373
N
0.716
orange1.1g046158m.g
Citrus sinensis
orange1.1g046158m.g
N
0.714
Eucgr.J02042
Eucalyptus grandis
Eucgr.J02042
N
0.711
Eucgr.B02350
Eucalyptus grandis
Eucgr.B02350
N
0.711
GLYMA11G14750
Glycine max
GLYMA11G14750
N
0.708
MTR_4g064160
Medicago truncatula
MTR_4g064160
N
0.705
Solyc06g076280.1
Solanum lycopersicum
Solyc06g076280.1
N
0.700