cassava10826.m1 (Manihot esculenta)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 cassava10826.m1 T202041_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava10826.m1 GRAS 146 516

Links

Other GRAS family TFs
Other Manihot esculenta TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.919
27613.m000642 Ricinus communis 27613.m000642 N 0.889
SCL5 Populus trichocarpa POPTR_0001s37270 N 0.854
SapurV1A.0030s0420 Salix purpurea SapurV1A.0030s0420 N 0.846
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.835
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.832
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.829
TCM_030733 Theobroma cacao TCM_030733 N 0.827
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.827
cassava34106.m1 Manihot esculenta cassava34106.m1 N 0.824
Pm012019 Prunus mume Pm012019 N 0.824
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.824
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.824
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.821
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.821
Lus10003772.g Linum usitatissimum Lus10003772.g N 0.820
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.818
Pm015021 Prunus mume Pm015021 N 0.818
29949.m000124 Ricinus communis 29949.m000124 N 0.818
TCM_002319 Theobroma cacao TCM_002319 N 0.816
MDP0000152670 Malus domestica MDP0000152670 N 0.816
MDP0000804652 Malus domestica MDP0000804652 N 0.816
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.816
Lus10016596.g Linum usitatissimum Lus10016596.g N 0.813
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N 0.813
MDP0000284679 Malus domestica MDP0000284679 N 0.810
MDP0000205236 Malus domestica MDP0000205236 N 0.810
Bo9g009240 Brassica oleracea Bo9g009240 N 0.810
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.808
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.805
Ca_09786 Cicer arietinum Ca_09786 N 0.802
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N 0.802
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.802
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.802
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.799
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.797
Cla001429 Citrullus lanatus Cla001429 N 0.794
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.794
PK09018.1 Cannabis sativa PK09018.1 N 0.791
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.791
Ciclev10014845m.g Citrus clementina Ciclev10014845m.g N 0.791
LjSGA_018703.2 Lotus japonicus LjSGA_018703.2 N 0.790
Gorai.009G446100 Gossypium raimondii Gorai.009G446100 N 0.789
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.789
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N 0.783
Gorai.002G096300 Gossypium raimondii Gorai.002G096300 N 0.783
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N 0.783
Carubv10026289m.g Capsella rubella Carubv10026289m.g N 0.783
PAT1 Arabidopsis thaliana AT5G48150 N 0.780
PK15082.1 Cannabis sativa PK15082.1 N 0.778
Solyc07g065270.1 Solanum lycopersicum Solyc07g065270.1 N 0.775
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N 0.772
Eucgr.F03523 Eucalyptus grandis Eucgr.F03523 N 0.772
Bra026077 Brassica rapa Bra026077 N 0.771
PAT1 Arabidopsis lyrata scaffold_801100.1 N 0.767
PGSC0003DMG400022187 Solanum tuberosum PGSC0003DMG400022187 N 0.767
Lus10006369.g Linum usitatissimum Lus10006369.g N 0.761
Bo2g149670 Brassica oleracea Bo2g149670 N 0.759
Lus10012323.g Linum usitatissimum Lus10012323.g N 0.759
Bra020715 Brassica rapa Bra020715 N 0.759
Bostr.26675s0117 Boechera stricta Bostr.26675s0117 N 0.759
Bo9g009260 Brassica oleracea Bo9g009260 N 0.756
SCL5 Arabidopsis lyrata fgenesh2_kg.1__4145__AT1G50600.1 N 0.756
Bra036185 Brassica rapa Bra036185 N 0.756
Bo7g089080 Brassica oleracea Bo7g089080 N 0.756
Bra018860 Brassica rapa Bra018860 N 0.756
Bo6g022330 Brassica oleracea Bo6g022330 N 0.756
SCL5 Arabidopsis thaliana AT1G50600 N 0.756
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N 0.753
Cagra.7055s0004 Capsella grandiflora Cagra.7055s0004 N 0.751
Carubv10008830m.g Capsella rubella Carubv10008830m.g N 0.751
Ca_13855 Cicer arietinum Ca_13855 N 0.751
Thhalv10011379m.g Eutrema salsugineum Thhalv10011379m.g N 0.748
Thhalv10004053m.g Eutrema salsugineum Thhalv10004053m.g N 0.746
Cla004565 Citrullus lanatus Cla004565 N 0.740
Aquca_028_00248 Aquilegia coerulea Aquca_028_00248 N 0.740
chr6.LjT11E14.20.nc Lotus japonicus chr6.LjT11E14.20.nc N 0.740
CIGR2 Oryza sativa OS07G0583600 N 0.736
AMTR_s00088p00161000 Amborella trichopoda AMTR_s00088p00161000 N 0.734
cassava8885.m1 Manihot esculenta cassava8885.m1 N 0.734
GLYMA02G46730 Glycine max GLYMA02G46730 N 0.732
Bra037509 Brassica rapa Bra037509 N 0.732
GLYMA14G01960 Glycine max GLYMA14G01960 N 0.732
MTR_3g056110 Medicago truncatula MTR_3g056110 N 0.729
Cucsa.042310 Cucumis sativus Cucsa.042310 N 0.729
MTR_5g094450 Medicago truncatula MTR_5g094450 N 0.726
GLYMA18G09030 Glycine max GLYMA18G09030 N 0.721
GLYMA08G43780 Glycine max GLYMA08G43780 N 0.718
GLYMA09G22110 Glycine max GLYMA09G22110 N 0.718
GSMUA_Achr8G03610_001 Musa acuminata GSMUA_Achr8G03610_001 N 0.715
Traes_2BS_D007D6598 Triticum aestivum Traes_2BS_D007D6598 N 0.713
LPERR07G17460 Leersia perrieri LPERR07G17460 N 0.713
PDK_20s1421311g003 Phoenix dactylifera PDK_20s1421311g003 N 0.713
ONIVA07G18570 Oryza nivara ONIVA07G18570 N 0.710
OPUNC07G19030 Oryza punctata OPUNC07G19030 N 0.710
OMERI07G16830 Oryza meridionalis OMERI07G16830 N 0.710
BGIOSGA026022 Oryza indica BGIOSGA026022 N 0.710
ORGLA07G0258500 Oryza glaberrima ORGLA07G0258500 N 0.710
ORUFI07G20980 Oryza rufipogon ORUFI07G20980 N 0.710
BRADI1G23350 Brachypodium distachyon BRADI1G23350 N 0.707
Pavir.Ba00562 Panicum virgatum Pavir.Ba00562 N 0.707
OBART07G20130 Oryza barthii OBART07G20130 N 0.707
OGLUM07G19910 Oryza glumaepatula OGLUM07G19910 N 0.707
SCL13 Vitis vinifera VIT_00s0463g00020 N 0.705
MLOC_65838 Hordeum vulgare MLOC_65838 N 0.705
OB07G25870 Oryza brachyantha OB07G25870 N 0.705
F775_15940 Aegilops tauschii F775_15940 N 0.705
Bra015156 Brassica rapa Bra015156 N 0.704
GRMZM2G431309 Zea mays GRMZM2G431309 N 0.702
Sb02g037650 Sorghum bicolor Sb02g037650 N 0.702
Ca_09696 Cicer arietinum Ca_09696 N 0.702
Si029418m.g Setaria italica Si029418m.g N 0.702
Bostr.19424s0023 Boechera stricta Bostr.19424s0023 N 0.701
Traes_5BL_A7C4DAE11 Triticum aestivum Traes_5BL_A7C4DAE11 N 0.701