cassava11920.valid.m1 (Manihot esculenta)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 cassava11920.valid.m1 T202042_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava11920.valid.m1 GRAS 43 422

Links

Other GRAS family TFs
Other Manihot esculenta TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SapurV1A.0865s0070 Salix purpurea SapurV1A.0865s0070 N 0.903
POPTR_0017s05450 Populus trichocarpa POPTR_0017s05450 N 0.882
POPTR_0007s01650 Populus trichocarpa POPTR_0007s01650 N 0.868
SapurV1A.1357s0040 Salix purpurea SapurV1A.1357s0040 N 0.863
Ciclev10020072m.g Citrus clementina Ciclev10020072m.g N 0.857
TCM_019978 Theobroma cacao TCM_019978 N 0.852
Pm007259 Prunus mume Pm007259 N 0.852
PRUPE_ppa1027119mg Prunus persica PRUPE_ppa1027119mg N 0.852
PK11022.1 Cannabis sativa PK11022.1 N 0.851
VIT_00s0226g00070 Vitis vinifera VIT_00s0226g00070 N 0.843
SapurV1A.1272s0060 Salix purpurea SapurV1A.1272s0060 N 0.838
SapurV1A.0791s0060 Salix purpurea SapurV1A.0791s0060 N 0.838
Gorai.011G140100 Gossypium raimondii Gorai.011G140100 N 0.830
Gorai.011G140300 Gossypium raimondii Gorai.011G140300 N 0.830
Eucgr.A00109 Eucalyptus grandis Eucgr.A00109 N 0.824
SapurV1A.0485s0200 Salix purpurea SapurV1A.0485s0200 N 0.816
chr3.CM0106.470.nd Lotus japonicus chr3.CM0106.470.nd N 0.793
Ca_02696 Cicer arietinum Ca_02696 N 0.791
GLYMA13G42100 Glycine max GLYMA13G42100 N 0.786
evm.TU.supercontig_9.323 Carica papaya evm.TU.supercontig_9.323 N 0.783
MTR_2g099110 Medicago truncatula MTR_2g099110 N 0.780
GLYMA15G03290 Glycine max GLYMA15G03290 N 0.780
PGSC0003DMG400014615 Solanum tuberosum PGSC0003DMG400014615 N 0.777
Solyc08g014030.1 Solanum lycopersicum Solyc08g014030.1 N 0.772
Aquca_058_00064 Aquilegia coerulea Aquca_058_00064 N 0.772
mgf025327m Mimulus guttatus mgf025327m N 0.751
Cla007135 Citrullus lanatus Cla007135 N 0.745
GSMUA_Achr6G21350_001 Musa acuminata GSMUA_Achr6G21350_001 N 0.731
Cucsa.362140 Cucumis sativus Cucsa.362140 N 0.725
GSMUA_Achr9G02380_001 Musa acuminata GSMUA_Achr9G02380_001 N 0.717
orange1.1g047247m.g Citrus sinensis orange1.1g047247m.g N 0.703