cassava14484.m1 (Manihot esculenta)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 cassava14484.m1 T202046_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava14484.m1 GRAS 271 630

Links

Other GRAS family TFs
Other Manihot esculenta TFs

94 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
28677.m000055 Ricinus communis 28677.m000055 N 0.778
29692.m000540 Ricinus communis 29692.m000540 N 0.944
AMTR_s00010p00148880 Amborella trichopoda AMTR_s00010p00148880 N 0.777
Aquca_002_01300 Aquilegia coerulea Aquca_002_01300 N 0.706
Aquca_091_00032 Aquilegia coerulea Aquca_091_00032 N 0.753
GAI Arabidopsis thaliana AT1G14920 N 0.815
RGA Arabidopsis thaliana AT2G01570 N 0.835
SLR1 Oryza indica BGIOSGA013420 N 0.715
Bo7g078550 Brassica oleracea Bo7g078550 N 0.846
Bo9g070200 Brassica oleracea Bo9g070200 N 0.761
Bostr.7128s0107 Boechera stricta Bostr.7128s0107 N 0.812
Bostr.7903s0021 Boechera stricta Bostr.7903s0021 N 0.852
Bra017443 Brassica rapa Bra017443 N 0.737
Bra024875 Brassica rapa Bra024875 N 0.844
BRADI1G11090 Brachypodium distachyon BRADI1G11090 N 0.708
Cagra.2235s0013 Capsella grandiflora Cagra.2235s0013 N 0.846
Cagra.3501s0003 Capsella grandiflora Cagra.3501s0003 N 0.824
Carubv10008833m.g Capsella rubella Carubv10008833m.g N 0.824
Carubv10018534m.g Capsella rubella Carubv10018534m.g N 0.827
cassava15077.m1 Manihot esculenta cassava15077.m1 N 0.952
cassava6237.valid.m1 Manihot esculenta cassava6237.valid.m1 I 0.794
Ca_05046 Cicer arietinum Ca_05046 N 0.822
Ca_13295 Cicer arietinum Ca_13295 I 0.742
Ciclev10011367m.g Citrus clementina Ciclev10011367m.g N 0.794
Ciclev10017466m.g Citrus clementina Ciclev10017466m.g N 0.805
Cla003996 Citrullus lanatus Cla003996 N 0.854
Cla020062 Citrullus lanatus Cla020062 N 0.770
Cucsa.006260 Cucumis sativus Cucsa.006260 N 0.762
Cucsa.280310 Cucumis sativus Cucsa.280310 N 0.857
Eucgr.G02163 Eucalyptus grandis Eucgr.G02163 N 0.852
Eucgr.J01594 Eucalyptus grandis Eucgr.J01594 I 0.765
evm.TU.supercontig_116.43 Carica papaya evm.TU.supercontig_116.43 I 0.770
evm.TU.supercontig_2.240 Carica papaya evm.TU.supercontig_2.240 I 0.922
F775_03572 Aegilops tauschii F775_03572 N 0.778
GAI Arabidopsis lyrata fgenesh2_kg.1__1634__AT1G14920.1 N 0.812
RGA1 Arabidopsis lyrata fgenesh2_kg.5__65__AT2G01570.1 N 0.835
GLYMA05G27190 Glycine max GLYMA05G27190 N 0.825
GLYMA08G10140 Glycine max GLYMA08G10140 N 0.817
GLYMA11G33720 Glycine max GLYMA11G33720 I 0.765
GLYMA18G04500 Glycine max GLYMA18G04500 I 0.770
Gorai.001G089400 Gossypium raimondii Gorai.001G089400 I 0.767
Gorai.002G177000 Gossypium raimondii Gorai.002G177000 N 0.882
GRMZM2G024973 Zea mays GRMZM2G024973 N 0.714
GRMZM2G144744 Zea mays GRMZM2G144744 N 0.731
LjT15P09.140.nc Lotus japonicus LjT15P09.140.nc N 0.769
LjT40K11.90.nc Lotus japonicus LjT40K11.90.nc N 0.769
LPERR03G26000 Leersia perrieri LPERR03G26000 N 0.713
Lus10009133.g Linum usitatissimum Lus10009133.g N 0.789
Lus10017626.g Linum usitatissimum Lus10017626.g N 0.751
Lus10033583.g Linum usitatissimum Lus10033583.g N 0.749
MDP0000237978 Malus domestica MDP0000237978 N 0.832
MDP0000669451 Malus domestica MDP0000669451 I 0.804
mgf008289m Mimulus guttatus mgf008289m N 0.817
mgf025772m Mimulus guttatus mgf025772m N 0.742
MLOC_67940 Hordeum vulgare MLOC_67940 N 0.718
MTR_3g065980 Medicago truncatula MTR_3g065980 N 0.766
OB03G38380 Oryza brachyantha OB03G38380 N 0.710
OBART03G31370 Oryza barthii OBART03G31370 N 0.715
OGLUM03G31610 Oryza glumaepatula OGLUM03G31610 N 0.715
OMERI03G27970 Oryza meridionalis OMERI03G27970 N 0.715
ONIVA03G32670 Oryza nivara ONIVA03G32670 N 0.715
OPUNC03G28530 Oryza punctata OPUNC03G28530 N 0.715
orange1.1g008153m.g Citrus sinensis orange1.1g008153m.g N 0.794
orange1.1g043131m.g Citrus sinensis orange1.1g043131m.g N 0.810
ORGLA03G0290200 Oryza glaberrima ORGLA03G0290200 N 0.715
ORUFI03G32650 Oryza rufipogon ORUFI03G32650 N 0.713
SLR1 Oryza sativa OS03G0707600 N 0.725
Pavir.Ia00840 Panicum virgatum Pavir.Ia00840 N 0.734
Pavir.Ib04357 Panicum virgatum Pavir.Ib04357 N 0.722
PGSC0003DMG400015692 Solanum tuberosum PGSC0003DMG400015692 N 0.796
PK14700.1 Cannabis sativa PK14700.1 N 0.885
Pm006304 Prunus mume Pm006304 N 0.854
Pm014329 Prunus mume Pm014329 I 0.807
POPTR_0004s08890 Populus trichocarpa POPTR_0004s08890 I 0.781
POPTR_0005s14540 Populus trichocarpa POPTR_0005s14540 I 0.784
POPTR_0008s13090 Populus trichocarpa POPTR_0008s13090 N 0.913
POPTR_0010s12080 Populus trichocarpa POPTR_0010s12080 N 0.908
PRUPE_ppa003206mg Prunus persica PRUPE_ppa003206mg I 0.804
PRUPE_ppa005944mg Prunus persica PRUPE_ppa005944mg N 0.852
SapurV1A.0015s0210 Salix purpurea SapurV1A.0015s0210 N 0.901
SapurV1A.0102s0220 Salix purpurea SapurV1A.0102s0220 N 0.764
SapurV1A.0405s0090 Salix purpurea SapurV1A.0405s0090 N 0.908
Sb01g010660 Sorghum bicolor Sb01g010660 N 0.728
Si039400m.g Setaria italica Si039400m.g N 0.719
Solyc11g011260.1 Solanum lycopersicum Solyc11g011260.1 N 0.792
TCM_010965 Theobroma cacao TCM_010965 N 0.899
TCM_019165 Theobroma cacao TCM_019165 N 0.778
Thhalv10005482m.g Eutrema salsugineum Thhalv10005482m.g N 0.849
Thhalv10007323m.g Eutrema salsugineum Thhalv10007323m.g N 0.818
Thhalv10018436m.g Eutrema salsugineum Thhalv10018436m.g N 0.704
Traes_4BS_2EE4988CD Triticum aestivum Traes_4BS_2EE4988CD N 0.714
Traes_4DS_ADBA6E30A Triticum aestivum Traes_4DS_ADBA6E30A N 0.715
GAI1 Vitis vinifera VIT_01s0011g05260 N 0.861
VIT_14s0006g00640 Vitis vinifera VIT_14s0006g00640 I 0.800