cassava15723.m1 (Manihot esculenta)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 cassava15723.m1 T202052_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava15723.m1 GRAS 292 663

Links

Other GRAS family TFs
Other Manihot esculenta TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava31335.valid.m1 Manihot esculenta cassava31335.valid.m1 N 0.895
27568.m000253 Ricinus communis 27568.m000253 N 0.857
POPTR_0008s05750 Populus trichocarpa POPTR_0008s05750 N 0.827
SapurV1A.0451s0060 Salix purpurea SapurV1A.0451s0060 N 0.827
Lus10023404.g Linum usitatissimum Lus10023404.g N 0.819
Lus10040284.g Linum usitatissimum Lus10040284.g N 0.816
TCM_042705 Theobroma cacao TCM_042705 N 0.805
Gorai.011G266200 Gossypium raimondii Gorai.011G266200 N 0.805
orange1.1g004488m.g Citrus sinensis orange1.1g004488m.g N 0.795
Ciclev10030787m.g Citrus clementina Ciclev10030787m.g N 0.792
VIT_13s0019g01810 Vitis vinifera VIT_13s0019g01810 N 0.773
XM_002316242.1 Populus trichocarpa POPTR_0010s20980 N 0.771
Gorai.010G201000 Gossypium raimondii Gorai.010G201000 N 0.768
mgf014897m Mimulus guttatus mgf014897m N 0.749
Eucgr.G02939 Eucalyptus grandis Eucgr.G02939 N 0.746
evm.TU.supercontig_1.422 Carica papaya evm.TU.supercontig_1.422 N 0.746
PRUPE_ppa021438mg Prunus persica PRUPE_ppa021438mg N 0.746
PGSC0003DMG400006352 Solanum tuberosum PGSC0003DMG400006352 N 0.745
Pm018822 Prunus mume Pm018822 N 0.743
VIT_13s0019g01700 Vitis vinifera VIT_13s0019g01700 N 0.729
Eucgr.G02941 Eucalyptus grandis Eucgr.G02941 N 0.727
PDK_20s1329542g002 Phoenix dactylifera PDK_20s1329542g002 N 0.718
Aquca_009_00954 Aquilegia coerulea Aquca_009_00954 N 0.714
VIT_08s0007g00510 Vitis vinifera VIT_08s0007g00510 N 0.711
Pm002685 Prunus mume Pm002685 N 0.708
Solyc04g011630.1 Solanum lycopersicum Solyc04g011630.1 N 0.707
gene18433-v1.0-hybrid Fragaria vesca gene18433-v1.0-hybrid N 0.707
PRUPE_ppa001883mg Prunus persica PRUPE_ppa001883mg N 0.705
SapurV1A.0001s1700 Salix purpurea SapurV1A.0001s1700 N 0.705
orange1.1g004514m.g Citrus sinensis orange1.1g004514m.g N 0.705
Ciclev10011141m.g Citrus clementina Ciclev10011141m.g N 0.705
Cla018179 Citrullus lanatus Cla018179 N 0.703
Cucsa.175500 Cucumis sativus Cucsa.175500 N 0.700
PGSC0003DMG400027198 Solanum tuberosum PGSC0003DMG400027198 N 0.700
VIT_13s0019g01710 Vitis vinifera VIT_13s0019g01710 N 0.700
mgf011165m Mimulus guttatus mgf011165m N 0.700