cassava19450.valid.m1 (Manihot esculenta)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 cassava19450.valid.m1 T202060_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava19450.valid.m1 GRAS 387 758

Links

Other GRAS family TFs
Other Manihot esculenta TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
28650.m000191 Ricinus communis 28650.m000191 N 0.897
SapurV1A.0041s0160 Salix purpurea SapurV1A.0041s0160 N 0.851
POPTR_0009s03790 Populus trichocarpa POPTR_0009s03790 N 0.851
SapurV1A.4599s0010 Salix purpurea SapurV1A.4599s0010 N 0.846
POPTR_0001s24850 Populus trichocarpa POPTR_0001s24850 N 0.843
SapurV1A.0040s0470 Salix purpurea SapurV1A.0040s0470 N 0.841
PRUPE_ppa003149mg Prunus persica PRUPE_ppa003149mg N 0.811
Pm000719 Prunus mume Pm000719 N 0.811
evm.TU.supercontig_81.126 Carica papaya evm.TU.supercontig_81.126 N 0.786
Lus10016521.g Linum usitatissimum Lus10016521.g N 0.786
Lus10040790.g Linum usitatissimum Lus10040790.g N 0.784
evm.TU.supercontig_81.124 Carica papaya evm.TU.supercontig_81.124 N 0.770
TCM_041815 Theobroma cacao TCM_041815 N 0.751
Traes_4DS_050789E2A Triticum aestivum Traes_4DS_050789E2A N 0.750
Thhalv10006868m.g Eutrema salsugineum Thhalv10006868m.g N 0.749
Ca_16678 Cicer arietinum Ca_16678 N 0.741
Gorai.003G130600 Gossypium raimondii Gorai.003G130600 N 0.741
GLYMA12G06670 Glycine max GLYMA12G06670 N 0.741
Bo01118s010 Brassica oleracea Bo01118s010 N 0.738
SCL14 Arabidopsis thaliana AT1G07530 N 0.732
Bostr.25219s0207 Boechera stricta Bostr.25219s0207 N 0.732
Bra030688 Brassica rapa Bra030688 N 0.732
Gorai.001G111500 Gossypium raimondii Gorai.001G111500 N 0.730
GLYMA11G14750 Glycine max GLYMA11G14750 N 0.727
orange1.1g046158m.g Citrus sinensis orange1.1g046158m.g N 0.724
Cagra.1671s0373 Capsella grandiflora Cagra.1671s0373 N 0.724
Carubv10008391m.g Capsella rubella Carubv10008391m.g N 0.724
MTR_4g064160 Medicago truncatula MTR_4g064160 N 0.724
VIT_06s0004g04950 Vitis vinifera VIT_06s0004g04950 N 0.722
Ciclev10027848m.g Citrus clementina Ciclev10027848m.g N 0.721
cassava19449.valid.m1 Manihot esculenta cassava19449.valid.m1 N 0.720
Eucgr.B02350 Eucalyptus grandis Eucgr.B02350 N 0.716
Eucgr.J02042 Eucalyptus grandis Eucgr.J02042 N 0.715
Thhalv10016312m.g Eutrema salsugineum Thhalv10016312m.g N 0.714
Bostr.27991s0167 Boechera stricta Bostr.27991s0167 N 0.714
Cagra.3264s0006 Capsella grandiflora Cagra.3264s0006 N 0.711
Solyc06g076280.1 Solanum lycopersicum Solyc06g076280.1 N 0.711
Carubv10024938m.g Capsella rubella Carubv10024938m.g N 0.711
TCM_041814 Theobroma cacao TCM_041814 N 0.709
VIT_08s0007g00510 Vitis vinifera VIT_08s0007g00510 N 0.708
Eucgr.J02044 Eucalyptus grandis Eucgr.J02044 N 0.707
SCL33 Arabidopsis thaliana AT2G29060 N 0.705
PGSC0003DMG401030325 Solanum tuberosum PGSC0003DMG401030325 N 0.704
Eucgr.J02041 Eucalyptus grandis Eucgr.J02041 N 0.702