CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava19916.m1
(
Manihot esculenta
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
cassava19916.m1
T202061_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava19916.m1
GRAS
353
712
ILNPICQAAELIESGNPVLAQGILARLNHQLSLSIGKPHIRAAFYFKEALQLLLHMNNTTIPSSVSACSLISKIGAYKSFSEISPILQFANFTCNQALLEACEGFDRIHIIDFDIGFGGQWASLMQELAMRNGGVPSLKITAFASPSSHDEVELGFTQENLRIFASEINMPFEVEILGLESINSGSWSLPFRASEKEVIAVNLPIGPFSNYPSSLPVALRFVKQLSPKVVVSLDKGCDRTDLPFAHQVNHSIQSYSSLLESLEAVNMNLDVLQKIERSLVQPGIENIVLGRHRHPDRTPTWRSLFLQTGFTPFQFSNFAESQAECLVQRTPVRGFNVEKRQSSLVLCWQGKELISASAWR
Links
Other
GRAS
family TFs
Other
Manihot esculenta
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30174.m008828
Ricinus communis
30174.m008828
N
0.852
POPTR_0002s14550
Populus trichocarpa
POPTR_0002s14550
N
0.784
POPTR_0014s05940
Populus trichocarpa
POPTR_0014s05940
N
0.784
POPTR_0014s05910
Populus trichocarpa
POPTR_0014s05910
N
0.781
POPTR_0002s14500
Populus trichocarpa
POPTR_0002s14500
N
0.770
SapurV1A.0033s0490
Salix purpurea
SapurV1A.0033s0490
N
0.770
SapurV1A.1971s0010
Salix purpurea
SapurV1A.1971s0010
N
0.768
SapurV1A.0382s0350
Salix purpurea
SapurV1A.0382s0350
N
0.768
SapurV1A.0248s0400
Salix purpurea
SapurV1A.0248s0400
N
0.762
SapurV1A.0033s0460
Salix purpurea
SapurV1A.0033s0460
N
0.753
TCM_005571
Theobroma cacao
TCM_005571
N
0.735
evm.TU.supercontig_49.157
Carica papaya
evm.TU.supercontig_49.157
N
0.725
Ciclev10019083m.g
Citrus clementina
Ciclev10019083m.g
N
0.721
orange1.1g005237m.g
Citrus sinensis
orange1.1g005237m.g
N
0.721
Gorai.008G106000
Gossypium raimondii
Gorai.008G106000
N
0.717
VIT_15s0048g00270
Vitis vinifera
VIT_15s0048g00270
N
0.709
Ciclev10019094m.g
Citrus clementina
Ciclev10019094m.g
N
0.707
orange1.1g005326m.g
Citrus sinensis
orange1.1g005326m.g
N
0.707
Solyc01g090950.2
Solanum lycopersicum
Solyc01g090950.2
N
0.703