cassava2243.valid.m1 (Manihot esculenta)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 cassava2243.valid.m1 T202067_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava2243.valid.m1 GRAS 285 651

Links

Other GRAS family TFs
Other Manihot esculenta TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30190.m011131 Ricinus communis 30190.m011131 N 0.912
cassava41178.m1 Manihot esculenta cassava41178.m1 N 0.910
POPTR_0003s12240 Populus trichocarpa POPTR_0003s12240 N 0.855
TCM_016186 Theobroma cacao TCM_016186 N 0.855
POPTR_0001s08850 Populus trichocarpa POPTR_0001s08850 N 0.849
SapurV1A.0507s0230 Salix purpurea SapurV1A.0507s0230 N 0.847
SapurV1A.1081s0090 Salix purpurea SapurV1A.1081s0090 N 0.847
Gorai.008G243900 Gossypium raimondii Gorai.008G243900 N 0.830
VIT_02s0025g04000 Vitis vinifera VIT_02s0025g04000 N 0.827
Pm023754 Prunus mume Pm023754 N 0.827
PRUPE_ppa017030mg Prunus persica PRUPE_ppa017030mg N 0.825
orange1.1g005954m.g Citrus sinensis orange1.1g005954m.g N 0.819
gene32389-v1.0-hybrid Fragaria vesca gene32389-v1.0-hybrid N 0.808
Ciclev10019186m.g Citrus clementina Ciclev10019186m.g N 0.805
MDP0000915100 Malus domestica MDP0000915100 N 0.805
Gorai.003G162400 Gossypium raimondii Gorai.003G162400 N 0.795
Eucgr.D01917 Eucalyptus grandis Eucgr.D01917 N 0.786
Solyc08g080400.1 Solanum lycopersicum Solyc08g080400.1 N 0.784
PGSC0003DMG400003047 Solanum tuberosum PGSC0003DMG400003047 N 0.784
MDP0000243351 Malus domestica MDP0000243351 N 0.784
PK26305.1 Cannabis sativa PK26305.1 N 0.781
evm.TU.supercontig_74.80 Carica papaya evm.TU.supercontig_74.80 N 0.764
Lus10029592.g Linum usitatissimum Lus10029592.g N 0.762
Lus10006322.g Linum usitatissimum Lus10006322.g N 0.762
Ca_08738 Cicer arietinum Ca_08738 N 0.760
LjSGA_020116.2 Lotus japonicus LjSGA_020116.2 N 0.756
GLYMA05G03490 Glycine max GLYMA05G03490 N 0.748
Cla004494 Citrullus lanatus Cla004494 N 0.748
Cucsa.041620 Cucumis sativus Cucsa.041620 N 0.742
Thhalv10023324m.g Eutrema salsugineum Thhalv10023324m.g N 0.732
Aquca_013_00407 Aquilegia coerulea Aquca_013_00407 N 0.732
GLYMA17G14030 Glycine max GLYMA17G14030 N 0.729
MTR_4g102790 Medicago truncatula MTR_4g102790 N 0.727
Bostr.22157s0011 Boechera stricta Bostr.22157s0011 N 0.725
Carubv10019945m.g Capsella rubella Carubv10019945m.g N 0.722
SCL28 Arabidopsis thaliana AT1G63100 N 0.721
Cagra.9501s0015 Capsella grandiflora Cagra.9501s0015 N 0.719
fgenesh1_pg.C_scaffold_2000170 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000170 N 0.717
mgf018176m Mimulus guttatus mgf018176m N 0.703