cassava24578.valid.m1 (Manihot esculenta)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 cassava24578.valid.m1 T202069_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava24578.valid.m1 GRAS 194 564

Links

Other GRAS family TFs
Other Manihot esculenta TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa003323mg Prunus persica PRUPE_ppa003323mg N 0.859
TCM_031132 Theobroma cacao TCM_031132 N 0.856
MDP0000205622 Malus domestica MDP0000205622 N 0.856
gene03285-v1.0-hybrid Fragaria vesca gene03285-v1.0-hybrid N 0.854
POPTR_0001s44090 Populus trichocarpa POPTR_0001s44090 N 0.851
SapurV1A.3085s0020 Salix purpurea SapurV1A.3085s0020 N 0.850
Pm029452 Prunus mume Pm029452 N 0.848
POPTR_0011s13460 Populus trichocarpa POPTR_0011s13460 N 0.846
GLYMA06G41500 Glycine max GLYMA06G41500 N 0.846
VIT_19s0014g04940 Vitis vinifera VIT_19s0014g04940 N 0.843
Gorai.002G080600 Gossypium raimondii Gorai.002G080600 N 0.843
Eucgr.F03414 Eucalyptus grandis Eucgr.F03414 N 0.840
SapurV1A.0327s0070 Salix purpurea SapurV1A.0327s0070 N 0.840
Cucsa.053270 Cucumis sativus Cucsa.053270 N 0.840
Ca_06943 Cicer arietinum Ca_06943 N 0.840
MTR_2g082090 Medicago truncatula MTR_2g082090 N 0.840
GLYMA12G34420 Glycine max GLYMA12G34420 N 0.840
GLYMA13G36120 Glycine max GLYMA13G36120 N 0.837
Ciclev10007843m.g Citrus clementina Ciclev10007843m.g N 0.837
orange1.1g040563m.g Citrus sinensis orange1.1g040563m.g N 0.833
Gorai.013G164700 Gossypium raimondii Gorai.013G164700 N 0.829
PK07026.1 Cannabis sativa PK07026.1 N 0.827
GLYMA12G16750 Glycine max GLYMA12G16750 N 0.824
Solyc07g063940.1 Solanum lycopersicum Solyc07g063940.1 N 0.824
Lus10035840.g Linum usitatissimum Lus10035840.g N 0.816
PGSC0003DMG400019232 Solanum tuberosum PGSC0003DMG400019232 N 0.810
Gorai.009G427800 Gossypium raimondii Gorai.009G427800 N 0.810
mgf007614m Mimulus guttatus mgf007614m N 0.805
Lus10036623.g Linum usitatissimum Lus10036623.g N 0.805
SapurV1A.0664s0120 Salix purpurea SapurV1A.0664s0120 N 0.797
PGSC0003DMG400021802 Solanum tuberosum PGSC0003DMG400021802 N 0.797
Solyc12g005340.1 Solanum lycopersicum Solyc12g005340.1 N 0.794
Aquca_005_00404 Aquilegia coerulea Aquca_005_00404 N 0.775
GRMZM5G821439 Zea mays GRMZM5G821439 N 0.753
Pavir.J35699 Panicum virgatum Pavir.J35699 N 0.751
Pavir.Bb02923 Panicum virgatum Pavir.Bb02923 N 0.749
Si029156m.g Setaria italica Si029156m.g N 0.748
Sb02g035680 Sorghum bicolor Sb02g035680 N 0.748
OPUNC07G16570 Oryza punctata OPUNC07G16570 N 0.745
OB07G23640 Oryza brachyantha OB07G23640 N 0.745
BRADI1G25370 Brachypodium distachyon BRADI1G25370 N 0.743
OMERI07G14660 Oryza meridionalis OMERI07G14660 N 0.740
MLOC_37712 Hordeum vulgare MLOC_37712 N 0.740
OLONG_024541 Oryza longistaminata OLONG_024541 N 0.737
BGIOSGA025902 Oryza indica BGIOSGA025902 N 0.737
OGLUM07G17420 Oryza glumaepatula OGLUM07G17420 N 0.737
ONIVA07G16090 Oryza nivara ONIVA07G16090 N 0.737
Traes_2BS_4600D4B54 Triticum aestivum Traes_2BS_4600D4B54 N 0.737
ORUFI07G18480 Oryza rufipogon ORUFI07G18480 N 0.737
OBART07G17780 Oryza barthii OBART07G17780 N 0.734
CIGR1 Oryza sativa OS07G0545800 N 0.734
ORGLA07G0142600 Oryza glaberrima ORGLA07G0142600 N 0.734
AMTR_s00043p00136400 Amborella trichopoda AMTR_s00043p00136400 N 0.733
Traes_2DS_2D035BAFD Triticum aestivum Traes_2DS_2D035BAFD N 0.732
TRIUR3_35245 Triticum urartu TRIUR3_35245 N 0.732
F775_07373 Aegilops tauschii F775_07373 N 0.732
Traes_2AS_620B821281 Triticum aestivum Traes_2AS_620B821281 N 0.732
GSMUA_Achr6G24310_001 Musa acuminata GSMUA_Achr6G24310_001 N 0.724