cassava25355.m1 (Manihot esculenta)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 cassava25355.m1 T202071_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava25355.m1 GRAS 20 403

Links

Other GRAS family TFs
Other Manihot esculenta TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava27916.m1 Manihot esculenta cassava27916.m1 N 0.854
POPTR_0013s11930 Populus trichocarpa POPTR_0013s11930 N 0.820
29728.m000844 Ricinus communis 29728.m000844 N 0.819
POPTR_0019s11540 Populus trichocarpa POPTR_0019s11540 N 0.798
SapurV1A.0179s0200 Salix purpurea SapurV1A.0179s0200 N 0.784
TCM_036707 Theobroma cacao TCM_036707 N 0.781
SapurV1A.2874s0010 Salix purpurea SapurV1A.2874s0010 N 0.781
Pm022208 Prunus mume Pm022208 N 0.770
PRUPE_ppa017519mg Prunus persica PRUPE_ppa017519mg N 0.770
Gorai.009G289600 Gossypium raimondii Gorai.009G289600 N 0.767
Eucgr.F02630 Eucalyptus grandis Eucgr.F02630 N 0.765
Ciclev10003213m.g Citrus clementina Ciclev10003213m.g N 0.765
evm.TU.supercontig_66.60 Carica papaya evm.TU.supercontig_66.60 N 0.762
orange1.1g041748m.g Citrus sinensis orange1.1g041748m.g N 0.756
MDP0000203826 Malus domestica MDP0000203826 N 0.747
MDP0000169115 Malus domestica MDP0000169115 N 0.742
chr5.LjT08L18.130.nd Lotus japonicus chr5.LjT08L18.130.nd N 0.742
MDP0000512470 Malus domestica MDP0000512470 N 0.742
MDP0000162468 Malus domestica MDP0000162468 N 0.742
GLYMA10G35920 Glycine max GLYMA10G35920 N 0.737
GLYMA20G31680 Glycine max GLYMA20G31680 N 0.737
gene27489-v1.0-hybrid Fragaria vesca gene27489-v1.0-hybrid N 0.728
GLYMA02G08241 Glycine max GLYMA02G08241 N 0.726
Gorai.005G075100 Gossypium raimondii Gorai.005G075100 N 0.715
mgf023389m Mimulus guttatus mgf023389m N 0.711
Ca_04298 Cicer arietinum Ca_04298 N 0.711
MTR_1g096030 Medicago truncatula MTR_1g096030 N 0.709
GLYMA16G27310 Glycine max GLYMA16G27310 N 0.706
evm.TU.supercontig_66.59 Carica papaya evm.TU.supercontig_66.59 N 0.705
Lus10014822.g Linum usitatissimum Lus10014822.g N 0.703