cassava32027.m1 (Manihot esculenta)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 cassava32027.m1 T202081_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava32027.m1 GRAS 101 484

Links

Other GRAS family TFs
Other Manihot esculenta TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10000940m.g Citrus clementina Ciclev10000940m.g N 0.832
cassava44367.m1 Manihot esculenta cassava44367.m1 N 0.829
POPTR_0005s15900 Populus trichocarpa POPTR_0005s15900 N 0.828
29908.m006159 Ricinus communis 29908.m006159 N 0.823
orange1.1g011012m.g Citrus sinensis orange1.1g011012m.g N 0.818
Pm004863 Prunus mume Pm004863 N 0.815
TCM_035069 Theobroma cacao TCM_035069 N 0.812
VIT_18s0001g03310 Vitis vinifera VIT_18s0001g03310 N 0.807
SapurV1A.0105s0110 Salix purpurea SapurV1A.0105s0110 N 0.807
gene11137-v1.0-hybrid Fragaria vesca gene11137-v1.0-hybrid N 0.804
PRUPE_ppa018977mg Prunus persica PRUPE_ppa018977mg N 0.802
Eucgr.L03490 Eucalyptus grandis Eucgr.L03490 N 0.793
POPTR_0002s08660 Populus trichocarpa POPTR_0002s08660 N 0.790
Gorai.010G048800 Gossypium raimondii Gorai.010G048800 N 0.788
MDP0000319342 Malus domestica MDP0000319342 N 0.787
SapurV1A.0010s0900 Salix purpurea SapurV1A.0010s0900 N 0.779
evm.TU.supercontig_36.32 Carica papaya evm.TU.supercontig_36.32 N 0.774
Gorai.009G244200 Gossypium raimondii Gorai.009G244200 N 0.769
MDP0000884524 Malus domestica MDP0000884524 N 0.766
Aquca_014_00175 Aquilegia coerulea Aquca_014_00175 N 0.766
Solyc11g013150.1 Solanum lycopersicum Solyc11g013150.1 N 0.764
Lus10008316.g Linum usitatissimum Lus10008316.g N 0.761
PGSC0003DMG400012071 Solanum tuberosum PGSC0003DMG400012071 N 0.758
Ca_26279 Cicer arietinum Ca_26279 N 0.747
GLYMA04G43090 Glycine max GLYMA04G43090 N 0.744
GLYMA06G11610 Glycine max GLYMA06G11610 N 0.739
MTR_3g072710 Medicago truncatula MTR_3g072710 N 0.736
Lus10028056.g Linum usitatissimum Lus10028056.g N 0.734
LjT26J05.10.nc Lotus japonicus LjT26J05.10.nc N 0.723
LjT15C06.70.nc Lotus japonicus LjT15C06.70.nc N 0.709