CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava32963.m1
(
Manihot esculenta
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
cassava32963.m1
T202082_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava32963.m1
GRAS
93
477
ASDILLETARAIADKNSSRVQQLMWMLNELASPYGDPDQKLASYFLQALFSRMTDSGERCYRTLASASDKTCSFESTRKMVLKFQEVSPWTTFGHVSCNGAIMEAFEGETKLHIIDISNTYCTQWPTLLEALATRTDETPHLRLTTVVAKKTSGGCGGNGGLAAAQKVMKEIGSRMEKFARLMGVPFKFNVIHHAGDLCDLNLAELDIKDDEALAINCVGSLHSVTSVANRRDYIISSFRRLQPRIITIVEEEADLDVGVDGLDFVRGFQECLRWFRVYFESLEESFSRTSNERLMLERTAGRAIVDLVACPPSDSIERRETATRWSSRLHASGFSAVLFSDEVCDDVRALLRRYKEGWSMTQCSDAGIFLCWKDQPVVWASAWR
Links
Other
GRAS
family TFs
Other
Manihot esculenta
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava7505.valid.m1
Manihot esculenta
cassava7505.valid.m1
N
0.932
29661.m000923
Ricinus communis
29661.m000923
N
0.900
SapurV1A.0461s0030
Salix purpurea
SapurV1A.0461s0030
N
0.894
evm.TU.supercontig_6.17
Carica papaya
evm.TU.supercontig_6.17
N
0.883
SHR
Populus trichocarpa
POPTR_0012s06430
N
0.881
TCM_000801
Theobroma cacao
TCM_000801
N
0.875
SHR
Vitis vinifera
VIT_07s0129g00030
N
0.851
MDP0000822651
Malus domestica
MDP0000822651
N
0.851
MDP0000840369
Malus domestica
MDP0000840369
N
0.851
MDP0000687763
Malus domestica
MDP0000687763
N
0.851
MDP0000171602
Malus domestica
MDP0000171602
N
0.841
orange1.1g035867m.g
Citrus sinensis
orange1.1g035867m.g
N
0.841
MDP0000165587
Malus domestica
MDP0000165587
N
0.840
PRUPE_ppa004454mg
Prunus persica
PRUPE_ppa004454mg
N
0.834
Gorai.003G030400
Gossypium raimondii
Gorai.003G030400
N
0.834
Pm002381
Prunus mume
Pm002381
N
0.832
Ciclev10025470m.g
Citrus clementina
Ciclev10025470m.g
N
0.827
Gorai.008G083500
Gossypium raimondii
Gorai.008G083500
N
0.827
Eucgr.I00704
Eucalyptus grandis
Eucgr.I00704
N
0.826
PGSC0003DMG400021444
Solanum tuberosum
PGSC0003DMG400021444
N
0.824
gene05757-v1.0-hybrid
Fragaria vesca
gene05757-v1.0-hybrid
N
0.823
Solyc02g092370.1
Solanum lycopersicum
Solyc02g092370.1
N
0.821
Aquca_060_00005
Aquilegia coerulea
Aquca_060_00005
N
0.819
Gorai.007G223500
Gossypium raimondii
Gorai.007G223500
N
0.808
Cla014238
Citrullus lanatus
Cla014238
N
0.797
Cucsa.103160
Cucumis sativus
Cucsa.103160
N
0.794
PK04147.1
Cannabis sativa
PK04147.1
N
0.781
MTR_5g015490
Medicago truncatula
MTR_5g015490
N
0.780
chr2.CM0168.260.nc
Lotus japonicus
chr2.CM0168.260.nc
N
0.780
GLYMA11G05110
Glycine max
GLYMA11G05110
N
0.778
GLYMA01G40180
Glycine max
GLYMA01G40180
N
0.775
Ca_02226
Cicer arietinum
Ca_02226
N
0.774
GLYMA05G22460
Glycine max
GLYMA05G22460
N
0.750
MTR_4g097080
Medicago truncatula
MTR_4g097080
N
0.739
GLYMA17G17400
Glycine max
GLYMA17G17400
N
0.736
Ca_09352
Cicer arietinum
Ca_09352
N
0.717
SapurV1A.0865s0070
Salix purpurea
SapurV1A.0865s0070
N
0.710
PK11022.1
Cannabis sativa
PK11022.1
N
0.708