cassava41178.m1 (Manihot esculenta)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 cassava41178.m1 T202102_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava41178.m1 GRAS 276 642

Links

Other GRAS family TFs
Other Manihot esculenta TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava2243.valid.m1 Manihot esculenta cassava2243.valid.m1 N 0.910
30190.m011131 Ricinus communis 30190.m011131 N 0.893
POPTR_0003s12240 Populus trichocarpa POPTR_0003s12240 N 0.855
SapurV1A.1081s0090 Salix purpurea SapurV1A.1081s0090 N 0.855
TCM_016186 Theobroma cacao TCM_016186 N 0.852
POPTR_0001s08850 Populus trichocarpa POPTR_0001s08850 N 0.847
VIT_02s0025g04000 Vitis vinifera VIT_02s0025g04000 N 0.844
Gorai.008G243900 Gossypium raimondii Gorai.008G243900 N 0.841
orange1.1g005954m.g Citrus sinensis orange1.1g005954m.g N 0.841
SapurV1A.0507s0230 Salix purpurea SapurV1A.0507s0230 N 0.838
Pm023754 Prunus mume Pm023754 N 0.833
Ciclev10019186m.g Citrus clementina Ciclev10019186m.g N 0.825
PRUPE_ppa017030mg Prunus persica PRUPE_ppa017030mg N 0.825
Eucgr.D01917 Eucalyptus grandis Eucgr.D01917 N 0.814
MDP0000915100 Malus domestica MDP0000915100 N 0.814
gene32389-v1.0-hybrid Fragaria vesca gene32389-v1.0-hybrid N 0.808
Solyc08g080400.1 Solanum lycopersicum Solyc08g080400.1 N 0.800
Gorai.003G162400 Gossypium raimondii Gorai.003G162400 N 0.800
PGSC0003DMG400003047 Solanum tuberosum PGSC0003DMG400003047 N 0.800
PK26305.1 Cannabis sativa PK26305.1 N 0.792
evm.TU.supercontig_74.80 Carica papaya evm.TU.supercontig_74.80 N 0.784
MDP0000243351 Malus domestica MDP0000243351 N 0.780
Ca_08738 Cicer arietinum Ca_08738 N 0.773
LjSGA_020116.2 Lotus japonicus LjSGA_020116.2 N 0.766
Lus10006322.g Linum usitatissimum Lus10006322.g N 0.759
Lus10029592.g Linum usitatissimum Lus10029592.g N 0.759
Cla004494 Citrullus lanatus Cla004494 N 0.751
GLYMA05G03490 Glycine max GLYMA05G03490 N 0.751
Cucsa.041620 Cucumis sativus Cucsa.041620 N 0.740
MTR_4g102790 Medicago truncatula MTR_4g102790 N 0.740
Thhalv10023324m.g Eutrema salsugineum Thhalv10023324m.g N 0.732
Aquca_013_00407 Aquilegia coerulea Aquca_013_00407 N 0.729
Bostr.22157s0011 Boechera stricta Bostr.22157s0011 N 0.725
GLYMA17G14030 Glycine max GLYMA17G14030 N 0.724
SCL28 Arabidopsis thaliana AT1G63100 N 0.723
Carubv10019945m.g Capsella rubella Carubv10019945m.g N 0.722
Cagra.9501s0015 Capsella grandiflora Cagra.9501s0015 N 0.719
fgenesh1_pg.C_scaffold_2000170 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000170 N 0.714
mgf018176m Mimulus guttatus mgf018176m N 0.706
Bra026999 Brassica rapa Bra026999 N 0.701