cassava42388.valid.m1 (Manihot esculenta)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 cassava42388.valid.m1 T202103_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava42388.valid.m1 GRAS 211 581

Links

Other GRAS family TFs
Other Manihot esculenta TFs

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29648.m001919 Ricinus communis 29648.m001919 N 0.883
AMTR_s00186p00018500 Amborella trichopoda AMTR_s00186p00018500 N 0.734
Aquca_014_00370 Aquilegia coerulea Aquca_014_00370 N 0.764
SCL1 Arabidopsis thaliana AT1G21450 N 0.738
Bo5g034360 Brassica oleracea Bo5g034360 N 0.740
Bo7g059410 Brassica oleracea Bo7g059410 N 0.717
Bostr.25570s0024 Boechera stricta Bostr.25570s0024 N 0.732
Bra012280 Brassica rapa Bra012280 N 0.724
Bra017915 Brassica rapa Bra017915 N 0.743
Cagra.1632s0036 Capsella grandiflora Cagra.1632s0036 N 0.734
Carubv10008658m.g Capsella rubella Carubv10008658m.g N 0.724
cassava26784.m1 Manihot esculenta cassava26784.m1 N 0.927
Ca_03920 Cicer arietinum Ca_03920 N 0.753
chr1.CM0982.460.nd Lotus japonicus chr1.CM0982.460.nd N 0.844
Ciclev10000671m.g Citrus clementina Ciclev10000671m.g N 0.821
Cla015267 Citrullus lanatus Cla015267 N 0.753
Cucsa.079150 Cucumis sativus Cucsa.079150 N 0.764
Eucgr.F04276 Eucalyptus grandis Eucgr.F04276 N 0.789
evm.TU.supercontig_26.96 Carica papaya evm.TU.supercontig_26.96 N 0.803
SCL1 Arabidopsis lyrata fgenesh2_kg.1__2335__AT1G21450.1 N 0.748
gene01015-v1.0-hybrid Fragaria vesca gene01015-v1.0-hybrid N 0.805
GLYMA04G42090 Glycine max GLYMA04G42090 N 0.756
GLYMA06G12701 Glycine max GLYMA06G12701 N 0.765
GLYMA13G09220 Glycine max GLYMA13G09220 N 0.764
GLYMA14G27290 Glycine max GLYMA14G27290 N 0.757
Gorai.005G083700 Gossypium raimondii Gorai.005G083700 N 0.817
Gorai.009G251800 Gossypium raimondii Gorai.009G251800 N 0.813
GSMUA_Achr10G17290_001 Musa acuminata GSMUA_Achr10G17290_001 N 0.753
GSMUA_Achr3G02410_001 Musa acuminata GSMUA_Achr3G02410_001 N 0.732
Lus10029747.g Linum usitatissimum Lus10029747.g N 0.810
Lus10042776.g Linum usitatissimum Lus10042776.g N 0.813
MDP0000727836 Malus domestica MDP0000727836 N 0.808
MDP0000859087 Malus domestica MDP0000859087 N 0.805
mgf010500m Mimulus guttatus mgf010500m N 0.756
MTR_1g029420 Medicago truncatula MTR_1g029420 N 0.797
MTR_3g089055 Medicago truncatula MTR_3g089055 N 0.759
OBART01G39420 Oryza barthii OBART01G39420 N 0.702
OGLUM01G43650 Oryza glumaepatula OGLUM01G43650 N 0.702
OMERI01G36330 Oryza meridionalis OMERI01G36330 N 0.702
OPUNC01G38160 Oryza punctata OPUNC01G38160 N 0.702
orange1.1g007853m.g Citrus sinensis orange1.1g007853m.g N 0.821
ORGLA01G0333300 Oryza glaberrima ORGLA01G0333300 N 0.702
PDK_20s1392371g003 Phoenix dactylifera PDK_20s1392371g003 N 0.745
PGSC0003DMG400024853 Solanum tuberosum PGSC0003DMG400024853 N 0.734
PK29476.1 Cannabis sativa PK29476.1 N 0.794
Pm022704 Prunus mume Pm022704 N 0.805
POPTR_0002s07430 Populus trichocarpa POPTR_0002s07430 N 0.873
POPTR_0005s20890 Populus trichocarpa POPTR_0005s20890 N 0.862
PRUPE_ppa003310mg Prunus persica PRUPE_ppa003310mg N 0.810
SapurV1A.0261s0120 Salix purpurea SapurV1A.0261s0120 N 0.862
SapurV1A.0267s0240 Salix purpurea SapurV1A.0267s0240 N 0.848
Solyc04g064550.1 Solanum lycopersicum Solyc04g064550.1 N 0.737
TCM_035362 Theobroma cacao TCM_035362 N 0.832
Thhalv10007142m.g Eutrema salsugineum Thhalv10007142m.g N 0.740
VIT_04s0044g01370 Vitis vinifera VIT_04s0044g01370 N 0.774
SCL1 Vitis vinifera VIT_18s0001g15270 N 0.778