cassava8885.m1 (Manihot esculenta)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 cassava8885.m1 T202112_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava8885.m1 GRAS 141 475

Links

Other GRAS family TFs
Other Manihot esculenta TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
cassava34106.m1 Manihot esculenta cassava34106.m1 N 0.914
29949.m000124 Ricinus communis 29949.m000124 N 0.890
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.883
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.877
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.871
MDP0000804652 Malus domestica MDP0000804652 N 0.862
MDP0000152670 Malus domestica MDP0000152670 N 0.859
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.853
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.823
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N 0.814
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.808
PAT1 Arabidopsis lyrata scaffold_801100.1 N 0.808
Bra020715 Brassica rapa Bra020715 N 0.805
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.802
TCM_002319 Theobroma cacao TCM_002319 N 0.797
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.794
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.794
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.791
Pm015021 Prunus mume Pm015021 N 0.786
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.786
TCM_030733 Theobroma cacao TCM_030733 N 0.785
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.783
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.783
Lus10006369.g Linum usitatissimum Lus10006369.g N 0.781
Ca_09786 Cicer arietinum Ca_09786 N 0.772
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N 0.772
Lus10016596.g Linum usitatissimum Lus10016596.g N 0.760
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.756
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N 0.754
Ciclev10014845m.g Citrus clementina Ciclev10014845m.g N 0.753
Solyc07g065270.1 Solanum lycopersicum Solyc07g065270.1 N 0.748
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.743
Cla001429 Citrullus lanatus Cla001429 N 0.743
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.743
PAT1 Arabidopsis thaliana AT5G48150 N 0.743
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.743
SCL21 Arabidopsis thaliana AT2G04890 N 0.742
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N 0.740
Carubv10026289m.g Capsella rubella Carubv10026289m.g N 0.740
Lus10012323.g Linum usitatissimum Lus10012323.g N 0.738
PK09018.1 Cannabis sativa PK09018.1 N 0.737
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.736
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.734
27613.m000642 Ricinus communis 27613.m000642 N 0.732
Bra037509 Brassica rapa Bra037509 N 0.731
SCL5 Arabidopsis thaliana AT1G50600 N 0.730
Bo2g149670 Brassica oleracea Bo2g149670 N 0.726
Bostr.26675s0117 Boechera stricta Bostr.26675s0117 N 0.724
Bra036185 Brassica rapa Bra036185 N 0.724
Bo9g009260 Brassica oleracea Bo9g009260 N 0.724
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.721
SapurV1A.0030s0420 Salix purpurea SapurV1A.0030s0420 N 0.721
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.718
Thhalv10004053m.g Eutrema salsugineum Thhalv10004053m.g N 0.708
Pm012019 Prunus mume Pm012019 N 0.707
Bo7g089080 Brassica oleracea Bo7g089080 N 0.705
MTR_5g094450 Medicago truncatula MTR_5g094450 N 0.703
Ca_13855 Cicer arietinum Ca_13855 N 0.703
SCL5 Populus trichocarpa POPTR_0001s37270 N 0.702