CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.044690
(
Cucumis sativus
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Cucsa.044690
T202119_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.044690.1
GRAS
170
541
LQDTLIHCAQAIHDSDLNVATLFMDVLGQMVSVSGDPSQRLGAYLLEGLRARLERSGSAIYKSLKCKEPTSSELMSYMSILFQICPYFKFGYTSANAVIREAMVNEPIIHIIDFQIAQGSQYISLIQDLANRPGGPPALLRITGVDDSQSAHARGGGLQIVGQNLAQLAQSKGIPFQFHAAAMSGCDVEHSNLIIQPGEALAVNFPYTLHHMPDESVSTQNHRDRLLRLVKSLSPKVVTIIEQESNTNTSPFLLRFIETLDYYTAMFESIDVARSRDDKQRIRAEQHCVARDIVNMVACEGFERVERHELLGKWRMRMRMAGFTPYTMSPSVTGAVRNMLRDFNENYRLQEVDGAIYLGWKNRAMATASAWR
Links
Other
GRAS
family TFs
Other
Cucumis sativus
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla014623
Citrullus lanatus
Cla014623
N
0.946
PRUPE_ppa003910mg
Prunus persica
PRUPE_ppa003910mg
N
0.759
Pm012494
Prunus mume
Pm012494
N
0.756
GLYMA15G12320
Glycine max
GLYMA15G12320
N
0.743
GLYMA09G01440
Glycine max
GLYMA09G01440
N
0.740
Eucgr.D01435
Eucalyptus grandis
Eucgr.D01435
N
0.737
TCM_030393
Theobroma cacao
TCM_030393
N
0.729
GLYMA07G39650
Glycine max
GLYMA07G39650
N
0.726
chr4.CM0288.500.nc
Lotus japonicus
chr4.CM0288.500.nc
N
0.726
MDP0000254936
Malus domestica
MDP0000254936
N
0.724
chr6.LjT16B20.120.nc
Lotus japonicus
chr6.LjT16B20.120.nc
N
0.721
Ciclev10014811m.g
Citrus clementina
Ciclev10014811m.g
N
0.721
Ca_20223
Cicer arietinum
Ca_20223
N
0.718
GLYMA17G01150
Glycine max
GLYMA17G01150
N
0.718
orange1.1g008984m.g
Citrus sinensis
orange1.1g008984m.g
N
0.718
PK04573.1
Cannabis sativa
PK04573.1
N
0.715
Gorai.009G184100
Gossypium raimondii
Gorai.009G184100
N
0.710
SCL13
Vitis vinifera
VIT_00s0463g00020
N
0.710
Gorai.010G249400
Gossypium raimondii
Gorai.010G249400
N
0.707