CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aquca_002_01300
(
Aquilegia coerulea
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Aquca_002_01300
T202233_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_002_01300.1
GRAS
294
655
LVHTLMACAEAVQQDNLKLAENLVKQISLLAVSQAGAMKKVATYFAEALARRVYGFYPQPSLDSSFSDILQIHFYETCPHLKFAHFTANQAILDSLADSNRVHIIDFSMKQGIQWPALMQALAMRPNGPPKFRLTGIGPPQPDNTDALQQVGWKLAQFAENLHIEFEYRGFVANSLADLDASMFDLRHGETVAVNSVFELHQLLAQSGALNKVLSSIKDMKPKIITIVEQEANHNGPNFIDRFTEALHYYSSLFDSLEGYPLSPLSNQDLIMSEMYFGRQICNIVSCEGVDRTERHECLNQWRNRLESAGFSLSHLGSNTFRQVNSLLTMFDAGSGYNVEENNGCLLLGWHTRPLVASSAWQ
Links
Other
GRAS
family TFs
Other
Aquilegia coerulea
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VIT_14s0006g00640
Vitis vinifera
VIT_14s0006g00640
I
0.750
Pm014329
Prunus mume
Pm014329
I
0.747
PRUPE_ppa003206mg
Prunus persica
PRUPE_ppa003206mg
I
0.747
GAI1
Vitis vinifera
VIT_01s0011g05260
N
0.747
MDP0000669451
Malus domestica
MDP0000669451
I
0.742
orange1.1g008153m.g
Citrus sinensis
orange1.1g008153m.g
N
0.733
Ciclev10011367m.g
Citrus clementina
Ciclev10011367m.g
N
0.733
cassava6237.valid.m1
Manihot esculenta
cassava6237.valid.m1
I
0.731
Gorai.002G177000
Gossypium raimondii
Gorai.002G177000
N
0.728
POPTR_0008s13090
Populus trichocarpa
POPTR_0008s13090
N
0.728
29692.m000540
Ricinus communis
29692.m000540
N
0.728
cassava15077.m1
Manihot esculenta
cassava15077.m1
N
0.725
28677.m000055
Ricinus communis
28677.m000055
N
0.725
POPTR_0010s12080
Populus trichocarpa
POPTR_0010s12080
N
0.725
TCM_010965
Theobroma cacao
TCM_010965
N
0.725
POPTR_0005s14540
Populus trichocarpa
POPTR_0005s14540
I
0.723
POPTR_0004s08890
Populus trichocarpa
POPTR_0004s08890
I
0.722
GLYMA18G04500
Glycine max
GLYMA18G04500
I
0.714
Solyc11g011260.1
Solanum lycopersicum
Solyc11g011260.1
N
0.714
evm.TU.supercontig_2.240
Carica papaya
evm.TU.supercontig_2.240
I
0.714
SapurV1A.0015s0210
Salix purpurea
SapurV1A.0015s0210
N
0.714
SapurV1A.0405s0090
Salix purpurea
SapurV1A.0405s0090
N
0.714
PK14700.1
Cannabis sativa
PK14700.1
N
0.714
AMTR_s00010p00148880
Amborella trichopoda
AMTR_s00010p00148880
N
0.714
Cla003996
Citrullus lanatus
Cla003996
N
0.714
PGSC0003DMG400015692
Solanum tuberosum
PGSC0003DMG400015692
N
0.714
evm.TU.supercontig_116.43
Carica papaya
evm.TU.supercontig_116.43
I
0.712
Eucgr.J01594
Eucalyptus grandis
Eucgr.J01594
I
0.712
Cucsa.280310
Cucumis sativus
Cucsa.280310
N
0.708
Gorai.001G089400
Gossypium raimondii
Gorai.001G089400
I
0.708
cassava14484.m1
Manihot esculenta
cassava14484.m1
N
0.706
GLYMA11G33720
Glycine max
GLYMA11G33720
I
0.703
Ca_05046
Cicer arietinum
Ca_05046
N
0.700