Cagra.1158s0007 (Capsella grandiflora)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Cagra.1158s0007 T202316_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.1158s0007.1.p GRAS 42 405

Links

Other GRAS family TFs
Other Capsella grandiflora TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10015685m.g Capsella rubella Carubv10015685m.g N 0.978
SCL21 Arabidopsis lyrata scaffold_303269.1 N 0.945
Bostr.19424s0023 Boechera stricta Bostr.19424s0023 N 0.942
SCL21 Arabidopsis thaliana AT2G04890 N 0.940
Thhalv10002541m.g Eutrema salsugineum Thhalv10002541m.g N 0.904
Bo7g030310 Brassica oleracea Bo7g030310 N 0.874
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.745
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.742
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.739
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.739
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.739
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.737
Bra015156 Brassica rapa Bra015156 N 0.736
29949.m000124 Ricinus communis 29949.m000124 N 0.731
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N 0.731
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.731
Carubv10026289m.g Capsella rubella Carubv10026289m.g N 0.731
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.731
Bra020715 Brassica rapa Bra020715 N 0.731
TCM_002319 Theobroma cacao TCM_002319 N 0.729
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.726
Bo9g009260 Brassica oleracea Bo9g009260 N 0.725
PAT1 Arabidopsis thaliana AT5G48150 N 0.725
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.724
Ciclev10014845m.g Citrus clementina Ciclev10014845m.g N 0.721
Bo2g149670 Brassica oleracea Bo2g149670 N 0.721
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.720
Bra036185 Brassica rapa Bra036185 N 0.720
PAT1 Arabidopsis lyrata scaffold_801100.1 N 0.720
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N 0.720
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.720
Ca_09786 Cicer arietinum Ca_09786 N 0.718
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.717
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.712
Pm015021 Prunus mume Pm015021 N 0.712
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.712
Bo7g089080 Brassica oleracea Bo7g089080 N 0.709
MDP0000804652 Malus domestica MDP0000804652 N 0.709
Lus10012323.g Linum usitatissimum Lus10012323.g N 0.708
Cla001429 Citrullus lanatus Cla001429 N 0.707
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.705
MDP0000152670 Malus domestica MDP0000152670 N 0.703
Thhalv10004053m.g Eutrema salsugineum Thhalv10004053m.g N 0.703
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.702