Cagra.2235s0013 (Capsella grandiflora)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Cagra.2235s0013 T202325_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.2235s0013.1.p GRAS 234 594

Links

Other GRAS family TFs
Other Capsella grandiflora TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.7903s0021 Boechera stricta Bostr.7903s0021 N 0.992
RGA Arabidopsis thaliana AT2G01570 N 0.972
RGA1 Arabidopsis lyrata fgenesh2_kg.5__65__AT2G01570.1 N 0.969
Thhalv10005482m.g Eutrema salsugineum Thhalv10005482m.g N 0.964
Carubv10018534m.g Capsella rubella Carubv10018534m.g N 0.961
Bra024875 Brassica rapa Bra024875 N 0.947
Bo7g078550 Brassica oleracea Bo7g078550 N 0.944
Cagra.3501s0003 Capsella grandiflora Cagra.3501s0003 N 0.885
GAI Arabidopsis thaliana AT1G14920 N 0.883
Carubv10008833m.g Capsella rubella Carubv10008833m.g N 0.883
Thhalv10007323m.g Eutrema salsugineum Thhalv10007323m.g N 0.880
Bostr.7128s0107 Boechera stricta Bostr.7128s0107 N 0.877
GAI Arabidopsis lyrata fgenesh2_kg.1__1634__AT1G14920.1 N 0.877
cassava15077.m1 Manihot esculenta cassava15077.m1 N 0.866
29692.m000540 Ricinus communis 29692.m000540 N 0.863
POPTR_0008s13090 Populus trichocarpa POPTR_0008s13090 N 0.860
TCM_010965 Theobroma cacao TCM_010965 N 0.852
PK14700.1 Cannabis sativa PK14700.1 N 0.849
cassava14484.m1 Manihot esculenta cassava14484.m1 N 0.846
Gorai.002G177000 Gossypium raimondii Gorai.002G177000 N 0.844
POPTR_0010s12080 Populus trichocarpa POPTR_0010s12080 N 0.844
evm.TU.supercontig_2.240 Carica papaya evm.TU.supercontig_2.240 I 0.844
SapurV1A.0405s0090 Salix purpurea SapurV1A.0405s0090 N 0.841
Cucsa.280310 Cucumis sativus Cucsa.280310 N 0.838
Cla003996 Citrullus lanatus Cla003996 N 0.838
Bo9g070200 Brassica oleracea Bo9g070200 N 0.835
Bra017443 Brassica rapa Bra017443 N 0.830
Eucgr.G02163 Eucalyptus grandis Eucgr.G02163 N 0.830
SapurV1A.0015s0210 Salix purpurea SapurV1A.0015s0210 N 0.830
GAI1 Vitis vinifera VIT_01s0011g05260 N 0.824
Pm006304 Prunus mume Pm006304 N 0.824
PRUPE_ppa005944mg Prunus persica PRUPE_ppa005944mg N 0.818
GLYMA05G27190 Glycine max GLYMA05G27190 N 0.816
MDP0000237978 Malus domestica MDP0000237978 N 0.807
Ca_05046 Cicer arietinum Ca_05046 N 0.802
GLYMA08G10140 Glycine max GLYMA08G10140 N 0.796
orange1.1g043131m.g Citrus sinensis orange1.1g043131m.g N 0.790
Ciclev10017466m.g Citrus clementina Ciclev10017466m.g N 0.788
POPTR_0004s08890 Populus trichocarpa POPTR_0004s08890 I 0.777
mgf008289m Mimulus guttatus mgf008289m N 0.774
VIT_14s0006g00640 Vitis vinifera VIT_14s0006g00640 I 0.774
PGSC0003DMG400015692 Solanum tuberosum PGSC0003DMG400015692 N 0.771
POPTR_0005s14540 Populus trichocarpa POPTR_0005s14540 I 0.770
MDP0000669451 Malus domestica MDP0000669451 I 0.768
cassava6237.valid.m1 Manihot esculenta cassava6237.valid.m1 I 0.768
Pm014329 Prunus mume Pm014329 I 0.768
Solyc11g011260.1 Solanum lycopersicum Solyc11g011260.1 N 0.768
PRUPE_ppa003206mg Prunus persica PRUPE_ppa003206mg I 0.765
orange1.1g008153m.g Citrus sinensis orange1.1g008153m.g N 0.758
Ciclev10011367m.g Citrus clementina Ciclev10011367m.g N 0.758
AMTR_s00010p00148880 Amborella trichopoda AMTR_s00010p00148880 N 0.757
28677.m000055 Ricinus communis 28677.m000055 N 0.751
Gorai.001G089400 Gossypium raimondii Gorai.001G089400 I 0.747
Aquca_091_00032 Aquilegia coerulea Aquca_091_00032 N 0.746
GLYMA18G04500 Glycine max GLYMA18G04500 I 0.746
SapurV1A.0102s0220 Salix purpurea SapurV1A.0102s0220 N 0.743
Cucsa.006260 Cucumis sativus Cucsa.006260 N 0.743
Cla020062 Citrullus lanatus Cla020062 N 0.743
Eucgr.J01594 Eucalyptus grandis Eucgr.J01594 I 0.742
LjT15P09.140.nc Lotus japonicus LjT15P09.140.nc N 0.741
LjT40K11.90.nc Lotus japonicus LjT40K11.90.nc N 0.741
MTR_3g065980 Medicago truncatula MTR_3g065980 N 0.741
GLYMA11G33720 Glycine max GLYMA11G33720 I 0.740
evm.TU.supercontig_116.43 Carica papaya evm.TU.supercontig_116.43 I 0.737
Lus10017626.g Linum usitatissimum Lus10017626.g N 0.729
Ca_13295 Cicer arietinum Ca_13295 I 0.729
Lus10033583.g Linum usitatissimum Lus10033583.g N 0.726
mgf025772m Mimulus guttatus mgf025772m N 0.721
TCM_019165 Theobroma cacao TCM_019165 N 0.715