Cagra.2235s0013 (Capsella grandiflora)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Cagra.2235s0013 T202325_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.2235s0013.1.p GRAS 234 594

Links

Other GRAS family TFs
Other Capsella grandiflora TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
28677.m000055 Ricinus communis 28677.m000055 N 0.751
29692.m000540 Ricinus communis 29692.m000540 N 0.863
AMTR_s00010p00148880 Amborella trichopoda AMTR_s00010p00148880 N 0.757
Aquca_091_00032 Aquilegia coerulea Aquca_091_00032 N 0.746
GAI Arabidopsis thaliana AT1G14920 N 0.883
RGA Arabidopsis thaliana AT2G01570 N 0.972
Bo7g078550 Brassica oleracea Bo7g078550 N 0.944
Bo9g070200 Brassica oleracea Bo9g070200 N 0.835
Bostr.7128s0107 Boechera stricta Bostr.7128s0107 N 0.877
Bostr.7903s0021 Boechera stricta Bostr.7903s0021 N 0.992
Bra017443 Brassica rapa Bra017443 N 0.830
Bra024875 Brassica rapa Bra024875 N 0.947
Cagra.3501s0003 Capsella grandiflora Cagra.3501s0003 N 0.885
Carubv10008833m.g Capsella rubella Carubv10008833m.g N 0.883
Carubv10018534m.g Capsella rubella Carubv10018534m.g N 0.961
cassava14484.m1 Manihot esculenta cassava14484.m1 N 0.846
cassava15077.m1 Manihot esculenta cassava15077.m1 N 0.866
cassava6237.valid.m1 Manihot esculenta cassava6237.valid.m1 I 0.768
Ca_05046 Cicer arietinum Ca_05046 N 0.802
Ca_13295 Cicer arietinum Ca_13295 I 0.729
Ciclev10011367m.g Citrus clementina Ciclev10011367m.g N 0.758
Ciclev10017466m.g Citrus clementina Ciclev10017466m.g N 0.788
Cla003996 Citrullus lanatus Cla003996 N 0.838
Cla020062 Citrullus lanatus Cla020062 N 0.743
Cucsa.006260 Cucumis sativus Cucsa.006260 N 0.743
Cucsa.280310 Cucumis sativus Cucsa.280310 N 0.838
Eucgr.G02163 Eucalyptus grandis Eucgr.G02163 N 0.830
Eucgr.J01594 Eucalyptus grandis Eucgr.J01594 I 0.742
evm.TU.supercontig_116.43 Carica papaya evm.TU.supercontig_116.43 I 0.737
evm.TU.supercontig_2.240 Carica papaya evm.TU.supercontig_2.240 I 0.844
GAI Arabidopsis lyrata fgenesh2_kg.1__1634__AT1G14920.1 N 0.877
RGA1 Arabidopsis lyrata fgenesh2_kg.5__65__AT2G01570.1 N 0.969
GLYMA05G27190 Glycine max GLYMA05G27190 N 0.816
GLYMA08G10140 Glycine max GLYMA08G10140 N 0.796
GLYMA11G33720 Glycine max GLYMA11G33720 I 0.740
GLYMA18G04500 Glycine max GLYMA18G04500 I 0.746
Gorai.001G089400 Gossypium raimondii Gorai.001G089400 I 0.747
Gorai.002G177000 Gossypium raimondii Gorai.002G177000 N 0.844
LjT15P09.140.nc Lotus japonicus LjT15P09.140.nc N 0.741
LjT40K11.90.nc Lotus japonicus LjT40K11.90.nc N 0.741
Lus10017626.g Linum usitatissimum Lus10017626.g N 0.729
Lus10033583.g Linum usitatissimum Lus10033583.g N 0.726
MDP0000237978 Malus domestica MDP0000237978 N 0.807
MDP0000669451 Malus domestica MDP0000669451 I 0.768
mgf008289m Mimulus guttatus mgf008289m N 0.774
mgf025772m Mimulus guttatus mgf025772m N 0.721
MTR_3g065980 Medicago truncatula MTR_3g065980 N 0.741
orange1.1g008153m.g Citrus sinensis orange1.1g008153m.g N 0.758
orange1.1g043131m.g Citrus sinensis orange1.1g043131m.g N 0.790
PGSC0003DMG400015692 Solanum tuberosum PGSC0003DMG400015692 N 0.771
PK14700.1 Cannabis sativa PK14700.1 N 0.849
Pm006304 Prunus mume Pm006304 N 0.824
Pm014329 Prunus mume Pm014329 I 0.768
POPTR_0004s08890 Populus trichocarpa POPTR_0004s08890 I 0.777
POPTR_0005s14540 Populus trichocarpa POPTR_0005s14540 I 0.770
POPTR_0008s13090 Populus trichocarpa POPTR_0008s13090 N 0.860
POPTR_0010s12080 Populus trichocarpa POPTR_0010s12080 N 0.844
PRUPE_ppa003206mg Prunus persica PRUPE_ppa003206mg I 0.765
PRUPE_ppa005944mg Prunus persica PRUPE_ppa005944mg N 0.818
SapurV1A.0015s0210 Salix purpurea SapurV1A.0015s0210 N 0.830
SapurV1A.0102s0220 Salix purpurea SapurV1A.0102s0220 N 0.743
SapurV1A.0405s0090 Salix purpurea SapurV1A.0405s0090 N 0.841
Solyc11g011260.1 Solanum lycopersicum Solyc11g011260.1 N 0.768
TCM_010965 Theobroma cacao TCM_010965 N 0.852
TCM_019165 Theobroma cacao TCM_019165 N 0.715
Thhalv10005482m.g Eutrema salsugineum Thhalv10005482m.g N 0.964
Thhalv10007323m.g Eutrema salsugineum Thhalv10007323m.g N 0.880
GAI1 Vitis vinifera VIT_01s0011g05260 N 0.824
VIT_14s0006g00640 Vitis vinifera VIT_14s0006g00640 I 0.774