Cagra.3264s0006 (Capsella grandiflora)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Cagra.3264s0006 T202328_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.3264s0006.1.p GRAS 339 713

Links

Other GRAS family TFs
Other Capsella grandiflora TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10024938m.g Capsella rubella Carubv10024938m.g N 0.995
Bostr.27991s0167 Boechera stricta Bostr.27991s0167 N 0.957
SCL33 Arabidopsis thaliana AT2G29060 N 0.946
Thhalv10016312m.g Eutrema salsugineum Thhalv10016312m.g N 0.895
Bra028390 Brassica rapa Bra028390 N 0.867
Bo4g065860 Brassica oleracea Bo4g065860 N 0.867
Bra035653 Brassica rapa Bra035653 N 0.835
Bo4g168030 Brassica oleracea Bo4g168030 N 0.835
Thhalv10006868m.g Eutrema salsugineum Thhalv10006868m.g N 0.805
Bra030688 Brassica rapa Bra030688 N 0.803
Bo01118s010 Brassica oleracea Bo01118s010 N 0.800
SCL14 Arabidopsis thaliana AT1G07530 N 0.800
Bostr.25219s0207 Boechera stricta Bostr.25219s0207 N 0.795
Cagra.1671s0373 Capsella grandiflora Cagra.1671s0373 N 0.792
Carubv10008391m.g Capsella rubella Carubv10008391m.g N 0.792
evm.TU.supercontig_81.126 Carica papaya evm.TU.supercontig_81.126 N 0.722
cassava19450.valid.m1 Manihot esculenta cassava19450.valid.m1 N 0.711
POPTR_0009s03790 Populus trichocarpa POPTR_0009s03790 N 0.711
evm.TU.supercontig_81.124 Carica papaya evm.TU.supercontig_81.124 N 0.708
SapurV1A.4599s0010 Salix purpurea SapurV1A.4599s0010 N 0.703
PRUPE_ppa003149mg Prunus persica PRUPE_ppa003149mg N 0.703
SapurV1A.0040s0470 Salix purpurea SapurV1A.0040s0470 N 0.700
Pm000719 Prunus mume Pm000719 N 0.700