Carubv10004949m.g (Capsella rubella)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Carubv10004949m.g T202345_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10004949m GRAS 41 401

Links

Other GRAS family TFs
Other Capsella rubella TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.6263s0002 Capsella grandiflora Cagra.6263s0002 N 0.992
fgenesh2_kg.7__3225__AT5G41920.1 Arabidopsis lyrata fgenesh2_kg.7__3225__AT5G41920.1 N 0.950
SCL23 Arabidopsis thaliana AT5G41920 N 0.947
Bostr.17016s0016 Boechera stricta Bostr.17016s0016 N 0.925
Bostr.25375s0003 Boechera stricta Bostr.25375s0003 N 0.914
Thhalv10027784m.g Eutrema salsugineum Thhalv10027784m.g N 0.889
Bo4g143710 Brassica oleracea Bo4g143710 N 0.836
Bostr.7200s0031 Boechera stricta Bostr.7200s0031 N 0.756
LPERR11G01220 Leersia perrieri LPERR11G01220 N 0.750
cassava29451.valid.m1 Manihot esculenta cassava29451.valid.m1 N 0.724
POPTR_0006s02220 Populus trichocarpa POPTR_0006s02220 N 0.719
Ciclev10011732m.g Citrus clementina Ciclev10011732m.g N 0.719
Cucsa.180010 Cucumis sativus Cucsa.180010 N 0.716
gene24339-v1.0-hybrid Fragaria vesca gene24339-v1.0-hybrid N 0.716
TCM_002021 Theobroma cacao TCM_002021 N 0.715
Pm014866 Prunus mume Pm014866 N 0.713
SapurV1A.0295s0450 Salix purpurea SapurV1A.0295s0450 N 0.713
chr3.CM0460.360.nd Lotus japonicus chr3.CM0460.360.nd N 0.713
Gorai.004G063200 Gossypium raimondii Gorai.004G063200 N 0.712
Eucgr.A00903 Eucalyptus grandis Eucgr.A00903 N 0.710
PRUPE_ppa005742mg Prunus persica PRUPE_ppa005742mg N 0.710
VIT_03s0017g01660 Vitis vinifera VIT_03s0017g01660 N 0.710
POPTR_0016s02030 Populus trichocarpa POPTR_0016s02030 N 0.708
29872.m000537 Ricinus communis 29872.m000537 N 0.702
GLYMA11G10220 Glycine max GLYMA11G10220 N 0.702
Cla005525 Citrullus lanatus Cla005525 N 0.702