Carubv10008391m.g (Capsella rubella)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Carubv10008391m.g T202346_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10008390m GRAS 378 749
Carubv10008391m GRAS 378 749

Links

Other GRAS family TFs
Other Capsella rubella TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.1671s0373 Capsella grandiflora Cagra.1671s0373 N 0.997
SCL14 Arabidopsis thaliana AT1G07530 N 0.962
Bostr.25219s0207 Boechera stricta Bostr.25219s0207 N 0.962
Thhalv10006868m.g Eutrema salsugineum Thhalv10006868m.g N 0.919
Bra030688 Brassica rapa Bra030688 N 0.911
Bo01118s010 Brassica oleracea Bo01118s010 N 0.908
Thhalv10016312m.g Eutrema salsugineum Thhalv10016312m.g N 0.803
Carubv10024938m.g Capsella rubella Carubv10024938m.g N 0.795
Bostr.27991s0167 Boechera stricta Bostr.27991s0167 N 0.795
Cagra.3264s0006 Capsella grandiflora Cagra.3264s0006 N 0.792
Bo4g065860 Brassica oleracea Bo4g065860 N 0.785
Bra028390 Brassica rapa Bra028390 N 0.784
SCL33 Arabidopsis thaliana AT2G29060 N 0.778
Bo4g168030 Brassica oleracea Bo4g168030 N 0.743
Bra035653 Brassica rapa Bra035653 N 0.741
evm.TU.supercontig_81.126 Carica papaya evm.TU.supercontig_81.126 N 0.735
PRUPE_ppa003149mg Prunus persica PRUPE_ppa003149mg N 0.724
cassava19450.valid.m1 Manihot esculenta cassava19450.valid.m1 N 0.724
Pm000719 Prunus mume Pm000719 N 0.722
POPTR_0009s03790 Populus trichocarpa POPTR_0009s03790 N 0.719
28650.m000191 Ricinus communis 28650.m000191 N 0.716
SapurV1A.4599s0010 Salix purpurea SapurV1A.4599s0010 N 0.714
evm.TU.supercontig_81.124 Carica papaya evm.TU.supercontig_81.124 N 0.711
SapurV1A.0040s0470 Salix purpurea SapurV1A.0040s0470 N 0.711
POPTR_0001s24850 Populus trichocarpa POPTR_0001s24850 N 0.703
SapurV1A.0041s0160 Salix purpurea SapurV1A.0041s0160 N 0.703
Ca_16678 Cicer arietinum Ca_16678 N 0.700