Carubv10025657m.g (Capsella rubella)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Carubv10025657m.g T202369_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10025657m GRAS 357 726

Links

Other GRAS family TFs
Other Capsella rubella TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Cagra.18121s0006 Capsella grandiflora Cagra.18121s0006 N 1.000
SCL9 Arabidopsis thaliana AT2G37650 N 0.957
Bostr.23794s0312 Boechera stricta Bostr.23794s0312 N 0.954
Bo3g031890 Brassica oleracea Bo3g031890 N 0.929
Thhalv10016318m.g Eutrema salsugineum Thhalv10016318m.g N 0.927
Bra000012 Brassica rapa Bra000012 N 0.927
fgenesh1_pg.C_scaffold_4001851 Arabidopsis lyrata fgenesh1_pg.C_scaffold_4001851 N 0.899
orange1.1g004514m.g Citrus sinensis orange1.1g004514m.g N 0.728
Ciclev10011141m.g Citrus clementina Ciclev10011141m.g N 0.728
TCM_021920 Theobroma cacao TCM_021920 N 0.728
Pm002685 Prunus mume Pm002685 N 0.723
PRUPE_ppa001883mg Prunus persica PRUPE_ppa001883mg N 0.720
SapurV1A.0001s1700 Salix purpurea SapurV1A.0001s1700 N 0.720
POPTR_0006s08690 Populus trichocarpa POPTR_0006s08690 N 0.712
Cucsa.175500 Cucumis sativus Cucsa.175500 N 0.707
PGSC0003DMG400019200 Solanum tuberosum PGSC0003DMG400019200 N 0.704
Cla018179 Citrullus lanatus Cla018179 N 0.701
Lus10024384.g Linum usitatissimum Lus10024384.g N 0.701