Ciclev10011367m.g (Citrus clementina)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Ciclev10011367m.g T202389_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10011367m GRAS 206 568

Links

Other GRAS family TFs
Other Citrus clementina TFs

98 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
orange1.1g008153m.g Citrus sinensis orange1.1g008153m.g N 0.992
Pm014329 Prunus mume Pm014329 I 0.886
POPTR_0005s14540 Populus trichocarpa POPTR_0005s14540 I 0.884
MDP0000669451 Malus domestica MDP0000669451 I 0.883
PRUPE_ppa003206mg Prunus persica PRUPE_ppa003206mg I 0.883
POPTR_0004s08890 Populus trichocarpa POPTR_0004s08890 I 0.881
cassava6237.valid.m1 Manihot esculenta cassava6237.valid.m1 I 0.872
VIT_14s0006g00640 Vitis vinifera VIT_14s0006g00640 I 0.869
28677.m000055 Ricinus communis 28677.m000055 N 0.867
Eucgr.J01594 Eucalyptus grandis Eucgr.J01594 I 0.864
evm.TU.supercontig_116.43 Carica papaya evm.TU.supercontig_116.43 I 0.856
Gorai.001G089400 Gossypium raimondii Gorai.001G089400 I 0.842
TCM_019165 Theobroma cacao TCM_019165 N 0.836
Lus10033583.g Linum usitatissimum Lus10033583.g N 0.830
Lus10017626.g Linum usitatissimum Lus10017626.g N 0.828
SapurV1A.0102s0220 Salix purpurea SapurV1A.0102s0220 N 0.828
LjT40K11.90.nc Lotus japonicus LjT40K11.90.nc N 0.825
LjT15P09.140.nc Lotus japonicus LjT15P09.140.nc N 0.825
Solyc11g011260.1 Solanum lycopersicum Solyc11g011260.1 N 0.825
PGSC0003DMG400015692 Solanum tuberosum PGSC0003DMG400015692 N 0.825
GLYMA18G04500 Glycine max GLYMA18G04500 I 0.819
GLYMA11G33720 Glycine max GLYMA11G33720 I 0.817
cassava15077.m1 Manihot esculenta cassava15077.m1 N 0.811
Cla020062 Citrullus lanatus Cla020062 N 0.808
GAI1 Vitis vinifera VIT_01s0011g05260 N 0.806
MTR_3g065980 Medicago truncatula MTR_3g065980 N 0.805
29692.m000540 Ricinus communis 29692.m000540 N 0.803
AMTR_s00010p00148880 Amborella trichopoda AMTR_s00010p00148880 N 0.799
PK14700.1 Cannabis sativa PK14700.1 N 0.796
cassava14484.m1 Manihot esculenta cassava14484.m1 N 0.794
Ca_13295 Cicer arietinum Ca_13295 I 0.794
POPTR_0008s13090 Populus trichocarpa POPTR_0008s13090 N 0.792
Cucsa.006260 Cucumis sativus Cucsa.006260 N 0.789
evm.TU.supercontig_2.240 Carica papaya evm.TU.supercontig_2.240 I 0.789
POPTR_0010s12080 Populus trichocarpa POPTR_0010s12080 N 0.786
Gorai.002G177000 Gossypium raimondii Gorai.002G177000 N 0.786
TCM_010965 Theobroma cacao TCM_010965 N 0.786
SapurV1A.0405s0090 Salix purpurea SapurV1A.0405s0090 N 0.783
Cla003996 Citrullus lanatus Cla003996 N 0.773
SapurV1A.0015s0210 Salix purpurea SapurV1A.0015s0210 N 0.772
Pm006304 Prunus mume Pm006304 N 0.770
mgf008289m Mimulus guttatus mgf008289m N 0.764
Cucsa.280310 Cucumis sativus Cucsa.280310 N 0.764
Thhalv10005482m.g Eutrema salsugineum Thhalv10005482m.g N 0.763
Cagra.2235s0013 Capsella grandiflora Cagra.2235s0013 N 0.758
Eucgr.G02163 Eucalyptus grandis Eucgr.G02163 N 0.758
Bostr.7903s0021 Boechera stricta Bostr.7903s0021 N 0.758
Aquca_091_00032 Aquilegia coerulea Aquca_091_00032 N 0.758
PRUPE_ppa005944mg Prunus persica PRUPE_ppa005944mg N 0.758
RGA Arabidopsis thaliana AT2G01570 N 0.757
Ca_05046 Cicer arietinum Ca_05046 N 0.756
RGA1 Arabidopsis lyrata fgenesh2_kg.5__65__AT2G01570.1 N 0.753
Bra024875 Brassica rapa Bra024875 N 0.750
Bo7g078550 Brassica oleracea Bo7g078550 N 0.750
GLYMA05G27190 Glycine max GLYMA05G27190 N 0.744
Traes_4AL_77F4CC833 Triticum aestivum Traes_4AL_77F4CC833 N 0.740
MDP0000237978 Malus domestica MDP0000237978 N 0.739
Cagra.3501s0003 Capsella grandiflora Cagra.3501s0003 N 0.739
Carubv10008833m.g Capsella rubella Carubv10008833m.g N 0.739
GLYMA08G10140 Glycine max GLYMA08G10140 N 0.739
Si039400m.g Setaria italica Si039400m.g N 0.739
Ciclev10017466m.g Citrus clementina Ciclev10017466m.g N 0.738
orange1.1g043131m.g Citrus sinensis orange1.1g043131m.g N 0.736
Pavir.Ia00840 Panicum virgatum Pavir.Ia00840 N 0.733
GAI Arabidopsis thaliana AT1G14920 N 0.733
Aquca_002_01300 Aquilegia coerulea Aquca_002_01300 N 0.733
Pavir.Ib04357 Panicum virgatum Pavir.Ib04357 N 0.733
GAI Arabidopsis lyrata fgenesh2_kg.1__1634__AT1G14920.1 N 0.733
Thhalv10007323m.g Eutrema salsugineum Thhalv10007323m.g N 0.733
LPERR03G26000 Leersia perrieri LPERR03G26000 N 0.731
MLOC_67940 Hordeum vulgare MLOC_67940 N 0.731
OB03G38380 Oryza brachyantha OB03G38380 N 0.731
ORGLA03G0290200 Oryza glaberrima ORGLA03G0290200 N 0.731
SLR1 Oryza indica BGIOSGA013420 N 0.731
SLR1 Oryza sativa OS03G0707600 N 0.731
ONIVA03G32670 Oryza nivara ONIVA03G32670 N 0.731
Bostr.7128s0107 Boechera stricta Bostr.7128s0107 N 0.731
OBART03G31370 Oryza barthii OBART03G31370 N 0.731
OMERI03G27970 Oryza meridionalis OMERI03G27970 N 0.731
Carubv10020171m.g Capsella rubella Carubv10020171m.g N 0.729
GRMZM2G144744 Zea mays GRMZM2G144744 N 0.728
GRMZM2G024973 Zea mays GRMZM2G024973 N 0.728
Traes_4DS_ADBA6E30A Triticum aestivum Traes_4DS_ADBA6E30A N 0.728
RGL2 Arabidopsis lyrata fgenesh2_kg.3__292__AT3G03450.1 I 0.728
BRADI1G11090 Brachypodium distachyon BRADI1G11090 N 0.728
OGLUM03G31610 Oryza glumaepatula OGLUM03G31610 N 0.727
OPUNC03G28530 Oryza punctata OPUNC03G28530 N 0.727
Traes_4BS_2EE4988CD Triticum aestivum Traes_4BS_2EE4988CD N 0.725
Carubv10018534m.g Capsella rubella Carubv10018534m.g N 0.725
ORUFI03G32650 Oryza rufipogon ORUFI03G32650 N 0.724
Sb01g010660 Sorghum bicolor Sb01g010660 N 0.722
RGL1 Arabidopsis lyrata fgenesh2_kg.2__868__AT1G66350.1 N 0.719
Cagra.0463s0002 Capsella grandiflora Cagra.0463s0002 N 0.714
SapurV1A.0230s0190 Salix purpurea SapurV1A.0230s0190 N 0.706
RGL1 Arabidopsis thaliana AT1G66350 N 0.703
mgf025772m Mimulus guttatus mgf025772m N 0.703
Thhalv10018436m.g Eutrema salsugineum Thhalv10018436m.g N 0.703
Bostr.26959s0284 Boechera stricta Bostr.26959s0284 N 0.700