Ciclev10017466m.g (Citrus clementina)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Ciclev10017466m.g T202396_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10017466m GRAS 228 589

Links

Other GRAS family TFs
Other Citrus clementina TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
28677.m000055 Ricinus communis 28677.m000055 N 0.733
29692.m000540 Ricinus communis 29692.m000540 N 0.830
AMTR_s00010p00148880 Amborella trichopoda AMTR_s00010p00148880 N 0.744
Aquca_091_00032 Aquilegia coerulea Aquca_091_00032 N 0.705
GAI Arabidopsis thaliana AT1G14920 N 0.769
RGA Arabidopsis thaliana AT2G01570 N 0.780
Bo7g078550 Brassica oleracea Bo7g078550 N 0.786
Bo9g070200 Brassica oleracea Bo9g070200 N 0.710
Bostr.7128s0107 Boechera stricta Bostr.7128s0107 N 0.763
Bostr.7903s0021 Boechera stricta Bostr.7903s0021 N 0.791
Bra024875 Brassica rapa Bra024875 N 0.786
Cagra.2235s0013 Capsella grandiflora Cagra.2235s0013 N 0.788
Cagra.3501s0003 Capsella grandiflora Cagra.3501s0003 N 0.760
Carubv10008833m.g Capsella rubella Carubv10008833m.g N 0.760
Carubv10018534m.g Capsella rubella Carubv10018534m.g N 0.758
cassava14484.m1 Manihot esculenta cassava14484.m1 N 0.805
cassava15077.m1 Manihot esculenta cassava15077.m1 N 0.813
cassava6237.valid.m1 Manihot esculenta cassava6237.valid.m1 I 0.749
Ca_05046 Cicer arietinum Ca_05046 N 0.774
Ca_13295 Cicer arietinum Ca_13295 I 0.705
Ciclev10011367m.g Citrus clementina Ciclev10011367m.g N 0.738
Cla003996 Citrullus lanatus Cla003996 N 0.794
Cla020062 Citrullus lanatus Cla020062 N 0.727
Cucsa.006260 Cucumis sativus Cucsa.006260 N 0.705
Cucsa.280310 Cucumis sativus Cucsa.280310 N 0.791
Eucgr.G02163 Eucalyptus grandis Eucgr.G02163 N 0.777
Eucgr.J01594 Eucalyptus grandis Eucgr.J01594 I 0.733
evm.TU.supercontig_116.43 Carica papaya evm.TU.supercontig_116.43 I 0.735
evm.TU.supercontig_2.240 Carica papaya evm.TU.supercontig_2.240 I 0.816
GAI Arabidopsis lyrata fgenesh2_kg.1__1634__AT1G14920.1 N 0.774
RGA1 Arabidopsis lyrata fgenesh2_kg.5__65__AT2G01570.1 N 0.780
GLYMA05G27190 Glycine max GLYMA05G27190 N 0.752
GLYMA08G10140 Glycine max GLYMA08G10140 N 0.744
GLYMA11G33720 Glycine max GLYMA11G33720 I 0.727
GLYMA18G04500 Glycine max GLYMA18G04500 I 0.744
Gorai.001G089400 Gossypium raimondii Gorai.001G089400 I 0.744
Gorai.002G177000 Gossypium raimondii Gorai.002G177000 N 0.797
LjT15P09.140.nc Lotus japonicus LjT15P09.140.nc N 0.716
LjT40K11.90.nc Lotus japonicus LjT40K11.90.nc N 0.716
Lus10017626.g Linum usitatissimum Lus10017626.g N 0.719
Lus10033583.g Linum usitatissimum Lus10033583.g N 0.716
MDP0000237978 Malus domestica MDP0000237978 N 0.769
MDP0000669451 Malus domestica MDP0000669451 I 0.758
mgf008289m Mimulus guttatus mgf008289m N 0.760
MTR_3g065980 Medicago truncatula MTR_3g065980 N 0.733
orange1.1g008153m.g Citrus sinensis orange1.1g008153m.g N 0.738
orange1.1g043131m.g Citrus sinensis orange1.1g043131m.g N 0.989
PGSC0003DMG400015692 Solanum tuberosum PGSC0003DMG400015692 N 0.744
PK14700.1 Cannabis sativa PK14700.1 N 0.805
Pm006304 Prunus mume Pm006304 N 0.783
Pm014329 Prunus mume Pm014329 I 0.747
POPTR_0004s08890 Populus trichocarpa POPTR_0004s08890 I 0.749
POPTR_0005s14540 Populus trichocarpa POPTR_0005s14540 I 0.745
POPTR_0008s13090 Populus trichocarpa POPTR_0008s13090 N 0.813
POPTR_0010s12080 Populus trichocarpa POPTR_0010s12080 N 0.813
PRUPE_ppa003206mg Prunus persica PRUPE_ppa003206mg I 0.741
PRUPE_ppa005944mg Prunus persica PRUPE_ppa005944mg N 0.777
SapurV1A.0015s0210 Salix purpurea SapurV1A.0015s0210 N 0.788
SapurV1A.0102s0220 Salix purpurea SapurV1A.0102s0220 N 0.724
SapurV1A.0405s0090 Salix purpurea SapurV1A.0405s0090 N 0.802
Solyc11g011260.1 Solanum lycopersicum Solyc11g011260.1 N 0.741
TCM_010965 Theobroma cacao TCM_010965 N 0.808
Thhalv10005482m.g Eutrema salsugineum Thhalv10005482m.g N 0.788
Thhalv10007323m.g Eutrema salsugineum Thhalv10007323m.g N 0.766
GAI1 Vitis vinifera VIT_01s0011g05260 N 0.788
VIT_14s0006g00640 Vitis vinifera VIT_14s0006g00640 I 0.752