CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Eucgr.A01279
(
Eucalyptus grandis
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Eucgr.A01279
T202430_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.A01279.1
GRAS
369
740
LRTLLINCAQAVAADDHLSTSEFLKQIRQHSSPFGDGNQRLAHCLADALEARQAGTGSQIYKGLISKRTSAANILKAYHLFLAACPFRKLSHFTANRTIRSVASDSMRVHIIDFGILYGFQWPTLMQRFSSRPGGPPKVRITGIDFPQPGFRPAERVEETGRRLAAYAELFKVPFEYNAIAKKWETIQVEELKIDKDELLVVNCIYRSKNLLDESVAADSMRNMVIKLIRRINPDVFIHGILNGSYNAPFFVTRFREALFHFSALFDMLETLVPRENRERMLIEKEMFGREALNVIACEGWERVERPETYKQWQVRNLRAGFVQHPFDRDIVKMATEKVQSSYHKDFMIDESGRWLLLGWKGRIIYALSAWK
Eucgr.A01279.2
GRAS
369
740
LRTLLINCAQAVAADDHLSTSEFLKQIRQHSSPFGDGNQRLAHCLADALEARQAGTGSQIYKGLISKRTSAANILKAYHLFLAACPFRKLSHFTANRTIRSVASDSMRVHIIDFGILYGFQWPTLMQRFSSRPGGPPKVRITGIDFPQPGFRPAERVEETGRRLAAYAELFKVPFEYNAIAKKWETIQVEELKIDKDELLVVNCIYRSKNLLDESVAADSMRNMVIKLIRRINPDVFIHGILNGSYNAPFFVTRFREALFHFSALFDMLETLVPRENRERMLIEKEMFGREALNVIACEGWERVERPETYKQWQVRNLRAGFVQHPFDRDIVKMATEKVQSSYHKDFMIDESGRWLLLGWKGRIIYALSAWK
Links
Other
GRAS
family TFs
Other
Eucalyptus grandis
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
orange1.1g004514m.g
Citrus sinensis
orange1.1g004514m.g
N
0.805
Ciclev10011141m.g
Citrus clementina
Ciclev10011141m.g
N
0.805
SapurV1A.0001s1700
Salix purpurea
SapurV1A.0001s1700
N
0.792
PRUPE_ppa001883mg
Prunus persica
PRUPE_ppa001883mg
N
0.786
Pm002685
Prunus mume
Pm002685
N
0.786
POPTR_0006s08690
Populus trichocarpa
POPTR_0006s08690
N
0.786
TCM_021920
Theobroma cacao
TCM_021920
N
0.778
VIT_08s0007g00510
Vitis vinifera
VIT_08s0007g00510
N
0.773
cassava2361.valid.m1
Manihot esculenta
cassava2361.valid.m1
N
0.770
GLYMA03G10320
Glycine max
GLYMA03G10320
N
0.770
Cucsa.175500
Cucumis sativus
Cucsa.175500
N
0.768
GLYMA07G15950
Glycine max
GLYMA07G15950
N
0.767
Ca_21138
Cicer arietinum
Ca_21138
N
0.765
29767.m000200
Ricinus communis
29767.m000200
N
0.764
GLYMA18G39920
Glycine max
GLYMA18G39920
N
0.762
Cla018179
Citrullus lanatus
Cla018179
N
0.759
MTR_7g062120
Medicago truncatula
MTR_7g062120
N
0.759
Lus10024384.g
Linum usitatissimum
Lus10024384.g
N
0.757
PK20526.1
Cannabis sativa
PK20526.1
N
0.749
Gorai.007G376400
Gossypium raimondii
Gorai.007G376400
N
0.741
PGSC0003DMG400019200
Solanum tuberosum
PGSC0003DMG400019200
N
0.741
gene18433-v1.0-hybrid
Fragaria vesca
gene18433-v1.0-hybrid
N
0.739
PGSC0003DMG400008904
Solanum tuberosum
PGSC0003DMG400008904
N
0.727
Solyc10g086530.1
Solanum lycopersicum
Solyc10g086530.1
N
0.724
Solyc09g010920.1
Solanum lycopersicum
Solyc09g010920.1
N
0.724
orange1.1g004488m.g
Citrus sinensis
orange1.1g004488m.g
N
0.716
Gorai.011G266200
Gossypium raimondii
Gorai.011G266200
N
0.714
TCM_042705
Theobroma cacao
TCM_042705
N
0.714
Ciclev10030787m.g
Citrus clementina
Ciclev10030787m.g
N
0.714
mgf011165m
Mimulus guttatus
mgf011165m
N
0.708
SCL9
Arabidopsis thaliana
AT2G37650
N
0.705
Aquca_009_00954
Aquilegia coerulea
Aquca_009_00954
N
0.705
Bra000012
Brassica rapa
Bra000012
N
0.703
27568.m000253
Ricinus communis
27568.m000253
N
0.700
Bo3g031890
Brassica oleracea
Bo3g031890
N
0.700
cassava31335.valid.m1
Manihot esculenta
cassava31335.valid.m1
N
0.700
GRMZM2G049159
Zea mays
GRMZM2G049159
N
0.700