CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Eucgr.F04276
(
Eucalyptus grandis
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Eucgr.F04276
T202461_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.F04276.1
GRAS
169
539
PKQLLFDCATAISEGNIREASIIIDRVRQIVSIQGDPPQRIAAYMVEGLAARMGASGKFLYKALKCKEPPSSDRLAAMQILFEVCPCFRFGFMAANGAIIEAFRGEKRVHIVDFDISQGSQYITLLQTLASLPGQRPYLRLTGVDDPESVQRPIGGLKNIGQRLENLAEALNIPFEFRAVASRTPLVTPGMLDLQPREALVVNFAFQLHHMPDESVSMINERDQLLRMVKSLNPKLVTVVEQNVNTNTAPFLVRFGEAYSYYSAVFDSLDATLPRESQDRVNVERQCLARDIINVVACEGEERIERYEVAGKWRARMMMAGFASCPMSKSVTESIINLIRQYSERYKIKDDMGALHFGWEEKSLIVASAWR
Eucgr.F04276.2
GRAS
169
539
PKQLLFDCATAISEGNIREASIIIDRVRQIVSIQGDPPQRIAAYMVEGLAARMGASGKFLYKALKCKEPPSSDRLAAMQILFEVCPCFRFGFMAANGAIIEAFRGEKRVHIVDFDISQGSQYITLLQTLASLPGQRPYLRLTGVDDPESVQRPIGGLKNIGQRLENLAEALNIPFEFRAVASRTPLVTPGMLDLQPREALVVNFAFQLHHMPDESVSMINERDQLLRMVKSLNPKLVTVVEQNVNTNTAPFLVRFGEAYSYYSAVFDSLDATLPRESQDRVNVERQCLARDIINVVACEGEERIERYEVAGKWRARMMMAGFASCPMSKSVTESIINLIRQYSERYKIKDDMGALHFGWEEKSLIVASAWR
Eucgr.F04276.3
GRAS
169
539
PKQLLFDCATAISEGNIREASIIIDRVRQIVSIQGDPPQRIAAYMVEGLAARMGASGKFLYKALKCKEPPSSDRLAAMQILFEVCPCFRFGFMAANGAIIEAFRGEKRVHIVDFDISQGSQYITLLQTLASLPGQRPYLRLTGVDDPESVQRPIGGLKNIGQRLENLAEALNIPFEFRAVASRTPLVTPGMLDLQPREALVVNFAFQLHHMPDESVSMINERDQLLRMVKSLNPKLVTVVEQNVNTNTAPFLVRFGEAYSYYSAVFDSLDATLPRESQDRVNVERQCLARDIINVVACEGEERIERYEVAGKWRARMMMAGFASCPMSKSVTESIINLIRQYSERYKIKDDMGALHFGWEEKSLIVASAWR
Links
Other
GRAS
family TFs
Other
Eucalyptus grandis
TFs
54 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
evm.TU.supercontig_26.96
Carica papaya
evm.TU.supercontig_26.96
N
0.821
cassava26784.m1
Manihot esculenta
cassava26784.m1
N
0.808
TCM_035362
Theobroma cacao
TCM_035362
N
0.808
chr1.CM0982.460.nd
Lotus japonicus
chr1.CM0982.460.nd
N
0.806
Gorai.005G083700
Gossypium raimondii
Gorai.005G083700
N
0.800
orange1.1g007853m.g
Citrus sinensis
orange1.1g007853m.g
N
0.799
Ciclev10000671m.g
Citrus clementina
Ciclev10000671m.g
N
0.799
MDP0000859087
Malus domestica
MDP0000859087
N
0.797
PRUPE_ppa003310mg
Prunus persica
PRUPE_ppa003310mg
N
0.791
MDP0000727836
Malus domestica
MDP0000727836
N
0.791
PK29476.1
Cannabis sativa
PK29476.1
N
0.791
Gorai.009G251800
Gossypium raimondii
Gorai.009G251800
N
0.791
cassava42388.valid.m1
Manihot esculenta
cassava42388.valid.m1
N
0.789
Ca_13101
Cicer arietinum
Ca_13101
N
0.784
MTR_1g029420
Medicago truncatula
MTR_1g029420
N
0.780
POPTR_0005s20890
Populus trichocarpa
POPTR_0005s20890
N
0.780
POPTR_0002s07430
Populus trichocarpa
POPTR_0002s07430
N
0.780
gene01015-v1.0-hybrid
Fragaria vesca
gene01015-v1.0-hybrid
N
0.780
Pm022704
Prunus mume
Pm022704
N
0.775
SCL1
Vitis vinifera
VIT_18s0001g15270
N
0.772
SapurV1A.0267s0240
Salix purpurea
SapurV1A.0267s0240
N
0.772
29648.m001919
Ricinus communis
29648.m001919
N
0.765
SapurV1A.0261s0120
Salix purpurea
SapurV1A.0261s0120
N
0.759
GLYMA04G42090
Glycine max
GLYMA04G42090
N
0.756
GLYMA06G12701
Glycine max
GLYMA06G12701
N
0.754
VIT_04s0044g01370
Vitis vinifera
VIT_04s0044g01370
N
0.753
MTR_3g089055
Medicago truncatula
MTR_3g089055
N
0.751
Lus10042776.g
Linum usitatissimum
Lus10042776.g
N
0.751
GLYMA13G09220
Glycine max
GLYMA13G09220
N
0.746
mgf010500m
Mimulus guttatus
mgf010500m
N
0.745
Aquca_014_00370
Aquilegia coerulea
Aquca_014_00370
N
0.745
Lus10029747.g
Linum usitatissimum
Lus10029747.g
N
0.745
LjSGA_053605.1
Lotus japonicus
LjSGA_053605.1
N
0.744
GLYMA14G27290
Glycine max
GLYMA14G27290
N
0.741
Solyc04g064550.1
Solanum lycopersicum
Solyc04g064550.1
N
0.740
Ca_03920
Cicer arietinum
Ca_03920
N
0.740
PGSC0003DMG400024853
Solanum tuberosum
PGSC0003DMG400024853
N
0.737
Cucsa.079150
Cucumis sativus
Cucsa.079150
N
0.734
Bo5g034360
Brassica oleracea
Bo5g034360
N
0.727
Thhalv10007142m.g
Eutrema salsugineum
Thhalv10007142m.g
N
0.726
SCL1
Arabidopsis lyrata
fgenesh2_kg.1__2335__AT1G21450.1
N
0.724
Bra017915
Brassica rapa
Bra017915
N
0.722
Cla015267
Citrullus lanatus
Cla015267
N
0.721
GSMUA_Achr10G17290_001
Musa acuminata
GSMUA_Achr10G17290_001
N
0.718
Ca_13102
Cicer arietinum
Ca_13102
N
0.718
SCL1
Arabidopsis thaliana
AT1G21450
N
0.716
Bostr.25570s0024
Boechera stricta
Bostr.25570s0024
N
0.715
BGIOSGA000383
Oryza indica
BGIOSGA000383
N
0.712
PDK_20s1392371g003
Phoenix dactylifera
PDK_20s1392371g003
N
0.712
AMTR_s00186p00018500
Amborella trichopoda
AMTR_s00186p00018500
N
0.710
Cagra.1632s0036
Capsella grandiflora
Cagra.1632s0036
N
0.708
GSMUA_Achr3G02410_001
Musa acuminata
GSMUA_Achr3G02410_001
N
0.707
Carubv10008658m.g
Capsella rubella
Carubv10008658m.g
N
0.705