Eucgr.J01594 (Eucalyptus grandis)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Eucgr.J01594 T202482_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RGL2
M02031_2.00
Arabidopsis thaliana
NGTACGGHN

NDCCGTACN
PBM
Weirauch et al.(2014)
pTH8681
0.704 0.704
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.J01594.1 GRAS 259 622

Links

Other GRAS family TFs
Other Eucalyptus grandis TFs

105 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
RGL2 Arabidopsis thaliana AT3G03450 D 0.704
cassava6237.valid.m1 Manihot esculenta cassava6237.valid.m1 I 0.870
GLYMA18G04500 Glycine max GLYMA18G04500 I 0.817
POPTR_0005s14540 Populus trichocarpa POPTR_0005s14540 I 0.862
MDP0000669451 Malus domestica MDP0000669451 I 0.878
Gorai.001G089400 Gossypium raimondii Gorai.001G089400 I 0.850
evm.TU.supercontig_2.240 Carica papaya evm.TU.supercontig_2.240 I 0.762
evm.TU.supercontig_116.43 Carica papaya evm.TU.supercontig_116.43 I 0.884
POPTR_0004s08890 Populus trichocarpa POPTR_0004s08890 I 0.856
Carubv10015212m.g Capsella rubella Carubv10015212m.g I 0.708
PRUPE_ppa003206mg Prunus persica PRUPE_ppa003206mg I 0.870
Ca_13295 Cicer arietinum Ca_13295 I 0.803
Bostr.19046s0061 Boechera stricta Bostr.19046s0061 I 0.709
VIT_14s0006g00640 Vitis vinifera VIT_14s0006g00640 I 0.853
Pm014329 Prunus mume Pm014329 I 0.878
GLYMA11G33720 Glycine max GLYMA11G33720 I 0.809
Thhalv10015535m.g Eutrema salsugineum Thhalv10015535m.g I 0.734
Bo5g149920 Brassica oleracea Bo5g149920 I 0.701
Bo9g160170 Brassica oleracea Bo9g160170 I 0.706
Bra013973 Brassica rapa Bra013973 I 0.704
Thhalv10020431m.g Eutrema salsugineum Thhalv10020431m.g I 0.709
RGL2 Arabidopsis lyrata fgenesh2_kg.3__292__AT3G03450.1 I 0.734
mgf008289m Mimulus guttatus mgf008289m N 0.748
Carubv10008833m.g Capsella rubella Carubv10008833m.g N 0.740
Cucsa.006260 Cucumis sativus Cucsa.006260 N 0.787
Cagra.3501s0003 Capsella grandiflora Cagra.3501s0003 N 0.740
Cagra.2235s0013 Capsella grandiflora Cagra.2235s0013 N 0.742
Cagra.0463s0002 Capsella grandiflora Cagra.0463s0002 N 0.717
Thhalv10018436m.g Eutrema salsugineum Thhalv10018436m.g N 0.701
LjT15P09.140.nc Lotus japonicus LjT15P09.140.nc N 0.813
Bostr.7128s0107 Boechera stricta Bostr.7128s0107 N 0.740
Bostr.26959s0284 Boechera stricta Bostr.26959s0284 N 0.709
Cucsa.280310 Cucumis sativus Cucsa.280310 N 0.756
Aquca_091_00032 Aquilegia coerulea Aquca_091_00032 N 0.756
PK14700.1 Cannabis sativa PK14700.1 N 0.784
Aquca_002_01300 Aquilegia coerulea Aquca_002_01300 N 0.712
Bostr.7903s0021 Boechera stricta Bostr.7903s0021 N 0.740
mgf025772m Mimulus guttatus mgf025772m N 0.726
cassava15077.m1 Manihot esculenta cassava15077.m1 N 0.770
Carubv10018534m.g Capsella rubella Carubv10018534m.g N 0.709
MDP0000237978 Malus domestica MDP0000237978 N 0.759
SapurV1A.0405s0090 Salix purpurea SapurV1A.0405s0090 N 0.759
SapurV1A.0230s0190 Salix purpurea SapurV1A.0230s0190 N 0.706
orange1.1g043131m.g Citrus sinensis orange1.1g043131m.g N 0.729
Pavir.Ia00840 Panicum virgatum Pavir.Ia00840 N 0.717
LjT40K11.90.nc Lotus japonicus LjT40K11.90.nc N 0.813
SapurV1A.0102s0220 Salix purpurea SapurV1A.0102s0220 N 0.828
Pavir.Ib04357 Panicum virgatum Pavir.Ib04357 N 0.717
Lus10033583.g Linum usitatissimum Lus10033583.g N 0.841
Lus10017626.g Linum usitatissimum Lus10017626.g N 0.834
orange1.1g008153m.g Citrus sinensis orange1.1g008153m.g N 0.862
Carubv10020171m.g Capsella rubella Carubv10020171m.g N 0.715
Ciclev10011367m.g Citrus clementina Ciclev10011367m.g N 0.864
Ciclev10017466m.g Citrus clementina Ciclev10017466m.g N 0.733
Eucgr.G02163 Eucalyptus grandis Eucgr.G02163 N 0.762
Thhalv10007323m.g Eutrema salsugineum Thhalv10007323m.g N 0.734
Thhalv10005482m.g Eutrema salsugineum Thhalv10005482m.g N 0.749
Gorai.002G177000 Gossypium raimondii Gorai.002G177000 N 0.762
SapurV1A.0015s0210 Salix purpurea SapurV1A.0015s0210 N 0.753
AMTR_s00010p00148880 Amborella trichopoda AMTR_s00010p00148880 N 0.792
GRMZM2G024973 Zea mays GRMZM2G024973 N 0.717
GRMZM2G144744 Zea mays GRMZM2G144744 N 0.719
LPERR03G26000 Leersia perrieri LPERR03G26000 N 0.734
MLOC_67940 Hordeum vulgare MLOC_67940 N 0.715
MTR_3g065980 Medicago truncatula MTR_3g065980 N 0.794
OB03G38380 Oryza brachyantha OB03G38380 N 0.723
OBART03G31370 Oryza barthii OBART03G31370 N 0.729
OGLUM03G31610 Oryza glumaepatula OGLUM03G31610 N 0.727
OMERI03G27970 Oryza meridionalis OMERI03G27970 N 0.729
GLYMA08G10140 Glycine max GLYMA08G10140 N 0.737
GLYMA05G27190 Glycine max GLYMA05G27190 N 0.740
RGA1 Arabidopsis lyrata fgenesh2_kg.5__65__AT2G01570.1 N 0.729
GAI Arabidopsis thaliana AT1G14920 N 0.740
RGL1 Arabidopsis thaliana AT1G66350 N 0.706
RGA Arabidopsis thaliana AT2G01570 N 0.729
SLR1 Oryza indica BGIOSGA013420 N 0.729
Bo7g078550 Brassica oleracea Bo7g078550 N 0.731
Bra024875 Brassica rapa Bra024875 N 0.731
BRADI1G11090 Brachypodium distachyon BRADI1G11090 N 0.720
GAI Arabidopsis lyrata fgenesh2_kg.1__1634__AT1G14920.1 N 0.742
RGL1 Arabidopsis lyrata fgenesh2_kg.2__868__AT1G66350.1 N 0.709
ONIVA03G32670 Oryza nivara ONIVA03G32670 N 0.729
OPUNC03G28530 Oryza punctata OPUNC03G28530 N 0.727
Traes_4BS_2EE4988CD Triticum aestivum Traes_4BS_2EE4988CD N 0.712
Traes_4DS_ADBA6E30A Triticum aestivum Traes_4DS_ADBA6E30A N 0.709
GAI1 Vitis vinifera VIT_01s0011g05260 N 0.781
Ca_05046 Cicer arietinum Ca_05046 N 0.756
Cla003996 Citrullus lanatus Cla003996 N 0.753
Cla020062 Citrullus lanatus Cla020062 N 0.803
Pm006304 Prunus mume Pm006304 N 0.767
28677.m000055 Ricinus communis 28677.m000055 N 0.842
29692.m000540 Ricinus communis 29692.m000540 N 0.781
TCM_019165 Theobroma cacao TCM_019165 N 0.809
TCM_010965 Theobroma cacao TCM_010965 N 0.770
Solyc11g011260.1 Solanum lycopersicum Solyc11g011260.1 N 0.820
ORGLA03G0290200 Oryza glaberrima ORGLA03G0290200 N 0.729
ORUFI03G32650 Oryza rufipogon ORUFI03G32650 N 0.726
SLR1 Oryza sativa OS03G0707600 N 0.729
PGSC0003DMG400015692 Solanum tuberosum PGSC0003DMG400015692 N 0.823
POPTR_0008s13090 Populus trichocarpa POPTR_0008s13090 N 0.776
POPTR_0010s12080 Populus trichocarpa POPTR_0010s12080 N 0.767
PRUPE_ppa005944mg Prunus persica PRUPE_ppa005944mg N 0.762
Sb01g010660 Sorghum bicolor Sb01g010660 N 0.706
Si039400m.g Setaria italica Si039400m.g N 0.720
cassava14484.m1 Manihot esculenta cassava14484.m1 N 0.765