gene01015-v1.0-hybrid (Fragaria vesca)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 gene01015-v1.0-hybrid T202547_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna01015.1-v1.0-hybrid GRAS 211 581

Links

Other GRAS family TFs
Other Fragaria vesca TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PRUPE_ppa003310mg Prunus persica PRUPE_ppa003310mg N 0.883
Pm022704 Prunus mume Pm022704 N 0.878
MDP0000859087 Malus domestica MDP0000859087 N 0.867
MDP0000727836 Malus domestica MDP0000727836 N 0.867
chr1.CM0982.460.nd Lotus japonicus chr1.CM0982.460.nd N 0.856
evm.TU.supercontig_26.96 Carica papaya evm.TU.supercontig_26.96 N 0.832
Ciclev10000671m.g Citrus clementina Ciclev10000671m.g N 0.832
orange1.1g007853m.g Citrus sinensis orange1.1g007853m.g N 0.832
cassava26784.m1 Manihot esculenta cassava26784.m1 N 0.829
TCM_035362 Theobroma cacao TCM_035362 N 0.829
Gorai.009G251800 Gossypium raimondii Gorai.009G251800 N 0.827
Ca_13101 Cicer arietinum Ca_13101 N 0.825
POPTR_0002s07430 Populus trichocarpa POPTR_0002s07430 N 0.824
MTR_1g029420 Medicago truncatula MTR_1g029420 N 0.821
POPTR_0005s20890 Populus trichocarpa POPTR_0005s20890 N 0.816
SapurV1A.0267s0240 Salix purpurea SapurV1A.0267s0240 N 0.813
29648.m001919 Ricinus communis 29648.m001919 N 0.811
Gorai.005G083700 Gossypium raimondii Gorai.005G083700 N 0.808
PK29476.1 Cannabis sativa PK29476.1 N 0.808
cassava42388.valid.m1 Manihot esculenta cassava42388.valid.m1 N 0.805
MTR_3g089055 Medicago truncatula MTR_3g089055 N 0.802
SapurV1A.0261s0120 Salix purpurea SapurV1A.0261s0120 N 0.802
LjSGA_053605.1 Lotus japonicus LjSGA_053605.1 N 0.800
GLYMA06G12701 Glycine max GLYMA06G12701 N 0.800
GLYMA04G42090 Glycine max GLYMA04G42090 N 0.797
Ca_03920 Cicer arietinum Ca_03920 N 0.797
SCL1 Vitis vinifera VIT_18s0001g15270 N 0.780
SCL1 Arabidopsis lyrata fgenesh2_kg.1__2335__AT1G21450.1 N 0.780
Eucgr.F04276 Eucalyptus grandis Eucgr.F04276 N 0.780
GLYMA13G09220 Glycine max GLYMA13G09220 N 0.778
VIT_04s0044g01370 Vitis vinifera VIT_04s0044g01370 N 0.777
Ca_13102 Cicer arietinum Ca_13102 N 0.775
Aquca_014_00370 Aquilegia coerulea Aquca_014_00370 N 0.772
Thhalv10007142m.g Eutrema salsugineum Thhalv10007142m.g N 0.772
GLYMA14G27290 Glycine max GLYMA14G27290 N 0.770
SCL1 Arabidopsis thaliana AT1G21450 N 0.770
Bo5g034360 Brassica oleracea Bo5g034360 N 0.770
Bra017915 Brassica rapa Bra017915 N 0.765
Cucsa.079150 Cucumis sativus Cucsa.079150 N 0.764
Bostr.25570s0024 Boechera stricta Bostr.25570s0024 N 0.762
Cagra.1632s0036 Capsella grandiflora Cagra.1632s0036 N 0.759
Carubv10008658m.g Capsella rubella Carubv10008658m.g N 0.757
Bo7g059410 Brassica oleracea Bo7g059410 N 0.755
Lus10042776.g Linum usitatissimum Lus10042776.g N 0.753
GSMUA_Achr3G02410_001 Musa acuminata GSMUA_Achr3G02410_001 N 0.751
Cla015267 Citrullus lanatus Cla015267 N 0.751
GSMUA_Achr10G17290_001 Musa acuminata GSMUA_Achr10G17290_001 N 0.748
Lus10029747.g Linum usitatissimum Lus10029747.g N 0.748
mgf010500m Mimulus guttatus mgf010500m N 0.745
Solyc04g064550.1 Solanum lycopersicum Solyc04g064550.1 N 0.745
PGSC0003DMG400024853 Solanum tuberosum PGSC0003DMG400024853 N 0.745
PDK_20s1392371g003 Phoenix dactylifera PDK_20s1392371g003 N 0.745
Bra012280 Brassica rapa Bra012280 N 0.744
AMTR_s00186p00018500 Amborella trichopoda AMTR_s00186p00018500 N 0.734
BGIOSGA000383 Oryza indica BGIOSGA000383 N 0.712
OLONG_003002 Oryza longistaminata OLONG_003002 N 0.705
ORGLA01G0333300 Oryza glaberrima ORGLA01G0333300 N 0.705
OB01G48180 Oryza brachyantha OB01G48180 N 0.705
OMERI01G36330 Oryza meridionalis OMERI01G36330 N 0.705
OBART01G39420 Oryza barthii OBART01G39420 N 0.705
OGLUM01G43650 Oryza glumaepatula OGLUM01G43650 N 0.705
ORUFI01G42800 Oryza rufipogon ORUFI01G42800 N 0.702
OPUNC01G38160 Oryza punctata OPUNC01G38160 N 0.702
ONIVA01G44280 Oryza nivara ONIVA01G44280 N 0.702