gene01356-v1.0-hybrid (Fragaria vesca)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 gene01356-v1.0-hybrid T202549_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna01356.1-v1.0-hybrid GRAS 345 709

Links

Other GRAS family TFs
Other Fragaria vesca TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pm016121 Prunus mume Pm016121 N 0.942
PRUPE_ppa024399mg Prunus persica PRUPE_ppa024399mg N 0.942
orange1.1g045762m.g Citrus sinensis orange1.1g045762m.g N 0.898
Ciclev10018153m.g Citrus clementina Ciclev10018153m.g N 0.898
cassava38785.m1 Manihot esculenta cassava38785.m1 N 0.882
POPTR_0001s33360 Populus trichocarpa POPTR_0001s33360 N 0.879
VIT_14s0068g01610 Vitis vinifera VIT_14s0068g01610 N 0.879
30131.m007029 Ricinus communis 30131.m007029 N 0.876
TCM_017269 Theobroma cacao TCM_017269 N 0.871
Solyc02g094340.1 Solanum lycopersicum Solyc02g094340.1 N 0.868
PGSC0003DMG400020243 Solanum tuberosum PGSC0003DMG400020243 N 0.865
Cucsa.087900 Cucumis sativus Cucsa.087900 N 0.862
Lus10041540.g Linum usitatissimum Lus10041540.g N 0.862
Lus10012554.g Linum usitatissimum Lus10012554.g N 0.862
MTR_7g027190 Medicago truncatula MTR_7g027190 N 0.860
evm.TU.supercontig_70.116 Carica papaya evm.TU.supercontig_70.116 N 0.854
Cla012038 Citrullus lanatus Cla012038 N 0.851
Gorai.006G044300 Gossypium raimondii Gorai.006G044300 N 0.848
mgf025393m Mimulus guttatus mgf025393m N 0.848
Eucgr.H03356 Eucalyptus grandis Eucgr.H03356 N 0.841
GLYMA16G05751 Glycine max GLYMA16G05751 N 0.837
GLYMA19G26735 Glycine max GLYMA19G26735 N 0.835
PK23183.1 Cannabis sativa PK23183.1 N 0.829
Aquca_011_00061 Aquilegia coerulea Aquca_011_00061 N 0.818
Aquca_021_00065 Aquilegia coerulea Aquca_021_00065 N 0.785
PK25517.1 Cannabis sativa PK25517.1 N 0.762
Pavir.J25769 Panicum virgatum Pavir.J25769 N 0.754
Eucgr.I01625 Eucalyptus grandis Eucgr.I01625 N 0.749
OPUNC11G12230 Oryza punctata OPUNC11G12230 N 0.712
BRADI4G18390 Brachypodium distachyon BRADI4G18390 N 0.708
LPERR11G11520 Leersia perrieri LPERR11G11520 N 0.702
Si027708m.g Setaria italica Si027708m.g N 0.702
Traes_2BS_D32231DB0 Triticum aestivum Traes_2BS_D32231DB0 N 0.702
Sb05g018070 Sorghum bicolor Sb05g018070 N 0.701
GRMZM2G342217 Zea mays GRMZM2G342217 N 0.701
ONIVA11G13990 Oryza nivara ONIVA11G13990 N 0.701