gene03551-v1.0-hybrid (Fragaria vesca)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 gene03551-v1.0-hybrid T202555_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna03551.1-v1.0-hybrid GRAS 154 524

Links

Other GRAS family TFs
Other Fragaria vesca TFs

90 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00088p00161000 Amborella trichopoda AMTR_s00088p00161000 N 0.710
Aquca_028_00248 Aquilegia coerulea Aquca_028_00248 N 0.726
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.762
SCL5 Arabidopsis lyrata fgenesh2_kg.1__4145__AT1G50600.1 N 0.734
PAT1 Arabidopsis lyrata scaffold_801100.1 N 0.724
SCL5 Arabidopsis thaliana AT1G50600 N 0.734
PAT1 Arabidopsis thaliana AT5G48150 N 0.737
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N 0.732
Bostr.26675s0117 Boechera stricta Bostr.26675s0117 N 0.737
Bo6g022330 Brassica oleracea Bo6g022330 N 0.732
Bo2g149670 Brassica oleracea Bo2g149670 N 0.724
Bo9g009260 Brassica oleracea Bo9g009260 N 0.729
Bo7g089080 Brassica oleracea Bo7g089080 N 0.730
Bo9g009240 Brassica oleracea Bo9g009240 N 0.730
Bra036185 Brassica rapa Bra036185 N 0.729
Bra018860 Brassica rapa Bra018860 N 0.732
Bra026077 Brassica rapa Bra026077 N 0.743
Bra020715 Brassica rapa Bra020715 N 0.724
Bra037509 Brassica rapa Bra037509 N 0.726
PK09018.1 Cannabis sativa PK09018.1 N 0.767
PK15082.1 Cannabis sativa PK15082.1 N 0.751
Cagra.7055s0004 Capsella grandiflora Cagra.7055s0004 N 0.729
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N 0.743
Carubv10026289m.g Capsella rubella Carubv10026289m.g N 0.743
Carubv10008830m.g Capsella rubella Carubv10008830m.g N 0.729
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.770
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.797
Ca_09696 Cicer arietinum Ca_09696 N 0.704
Ca_13855 Cicer arietinum Ca_13855 N 0.721
Ca_09786 Cicer arietinum Ca_09786 N 0.775
Cla004565 Citrullus lanatus Cla004565 N 0.734
Cla001429 Citrullus lanatus Cla001429 N 0.762
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N 0.772
Ciclev10014845m.g Citrus clementina Ciclev10014845m.g N 0.764
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.770
Cucsa.042310 Cucumis sativus Cucsa.042310 N 0.721
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.756
Eucgr.F03523 Eucalyptus grandis Eucgr.F03523 N 0.734
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.772
Thhalv10004053m.g Eutrema salsugineum Thhalv10004053m.g N 0.714
Thhalv10011379m.g Eutrema salsugineum Thhalv10011379m.g N 0.721
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.786
GLYMA14G01960 Glycine max GLYMA14G01960 N 0.726
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.786
GLYMA09G22110 Glycine max GLYMA09G22110 N 0.729
GLYMA08G43780 Glycine max GLYMA08G43780 N 0.702
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.775
GLYMA02G46730 Glycine max GLYMA02G46730 N 0.734
GLYMA18G09030 Glycine max GLYMA18G09030 N 0.713
Gorai.002G096300 Gossypium raimondii Gorai.002G096300 N 0.772
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.789
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.789
Gorai.009G446100 Gossypium raimondii Gorai.009G446100 N 0.775
Lus10003772.g Linum usitatissimum Lus10003772.g N 0.768
Lus10012323.g Linum usitatissimum Lus10012323.g N 0.727
Lus10016596.g Linum usitatissimum Lus10016596.g N 0.757
Lus10006369.g Linum usitatissimum Lus10006369.g N 0.733
chr6.LjT11E14.20.nc Lotus japonicus chr6.LjT11E14.20.nc N 0.707
LjSGA_018703.2 Lotus japonicus LjSGA_018703.2 N 0.741
MDP0000205236 Malus domestica MDP0000205236 N 0.840
MDP0000804652 Malus domestica MDP0000804652 N 0.791
MDP0000152670 Malus domestica MDP0000152670 N 0.789
MDP0000284679 Malus domestica MDP0000284679 N 0.840
cassava8885.m1 Manihot esculenta cassava8885.m1 N 0.772
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.805
cassava34106.m1 Manihot esculenta cassava34106.m1 N 0.786
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.813
MTR_5g094450 Medicago truncatula MTR_5g094450 N 0.704
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.780
CIGR2 Oryza sativa OS07G0583600 N 0.713
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N 0.726
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.780
SCL5 Populus trichocarpa POPTR_0001s37270 N 0.783
Pm012019 Prunus mume Pm012019 N 0.875
Pm015021 Prunus mume Pm015021 N 0.786
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N 0.874
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.789
29949.m000124 Ricinus communis 29949.m000124 N 0.767
27613.m000642 Ricinus communis 27613.m000642 N 0.810
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.780
SapurV1A.0030s0420 Salix purpurea SapurV1A.0030s0420 N 0.783
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.778
Solyc07g065270.1 Solanum lycopersicum Solyc07g065270.1 N 0.737
PGSC0003DMG400022187 Solanum tuberosum PGSC0003DMG400022187 N 0.734
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.778
TCM_002319 Theobroma cacao TCM_002319 N 0.789
TCM_030733 Theobroma cacao TCM_030733 N 0.806
SCL13 Vitis vinifera VIT_00s0463g00020 N 0.713
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.786
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.786