gene24339-v1.0-hybrid (Fragaria vesca)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 gene24339-v1.0-hybrid T202577_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna24339.1-v1.0-hybrid GRAS 75 436

Links

Other GRAS family TFs
Other Fragaria vesca TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pm014866 Prunus mume Pm014866 N 0.942
PRUPE_ppa005742mg Prunus persica PRUPE_ppa005742mg N 0.942
MDP0000287321 Malus domestica MDP0000287321 N 0.928
MDP0000289554 Malus domestica MDP0000289554 N 0.923
MDP0000269044 Malus domestica MDP0000269044 N 0.923
TCM_002021 Theobroma cacao TCM_002021 N 0.906
POPTR_0016s02030 Populus trichocarpa POPTR_0016s02030 N 0.892
PK21090.1 Cannabis sativa PK21090.1 N 0.889
Ciclev10011732m.g Citrus clementina Ciclev10011732m.g N 0.887
29872.m000537 Ricinus communis 29872.m000537 N 0.887
SapurV1A.0295s0450 Salix purpurea SapurV1A.0295s0450 N 0.884
Gorai.004G063200 Gossypium raimondii Gorai.004G063200 N 0.879
cassava29451.valid.m1 Manihot esculenta cassava29451.valid.m1 N 0.878
POPTR_0006s02220 Populus trichocarpa POPTR_0006s02220 N 0.878
evm.TU.supercontig_8.295 Carica papaya evm.TU.supercontig_8.295 N 0.876
chr3.CM0460.360.nd Lotus japonicus chr3.CM0460.360.nd N 0.876
VIT_03s0017g01660 Vitis vinifera VIT_03s0017g01660 N 0.867
Ca_11130 Cicer arietinum Ca_11130 N 0.865
orange1.1g013903m.g Citrus sinensis orange1.1g013903m.g N 0.862
Cla005525 Citrullus lanatus Cla005525 N 0.859
Eucgr.A00903 Eucalyptus grandis Eucgr.A00903 N 0.856
Cucsa.180010 Cucumis sativus Cucsa.180010 N 0.854
GLYMA11G10220 Glycine max GLYMA11G10220 N 0.854
SapurV1A.0154s0180 Salix purpurea SapurV1A.0154s0180 N 0.834
GLYMA12G02530 Glycine max GLYMA12G02530 N 0.831
LPERR11G01220 Leersia perrieri LPERR11G01220 N 0.812
MTR_4g076020 Medicago truncatula MTR_4g076020 N 0.801
Aquca_030_00364 Aquilegia coerulea Aquca_030_00364 N 0.801
Solyc07g043330.1 Solanum lycopersicum Solyc07g043330.1 N 0.785
PGSC0003DMG400011742 Solanum tuberosum PGSC0003DMG400011742 N 0.776
OPUNC07G18000 Oryza punctata OPUNC07G18000 N 0.760
BGIOSGA025964 Oryza indica BGIOSGA025964 N 0.760
ORUFI07G19860 Oryza rufipogon ORUFI07G19860 N 0.760
OGLUM07G18870 Oryza glumaepatula OGLUM07G18870 N 0.760
OS07G0567700 Oryza sativa OS07G0567700 N 0.760
ORGLA07G0244600 Oryza glaberrima ORGLA07G0244600 N 0.760
ONIVA07G17430 Oryza nivara ONIVA07G17430 N 0.760
OPUNC07G17970 Oryza punctata OPUNC07G17970 N 0.760
OMERI07G15800 Oryza meridionalis OMERI07G15800 N 0.757
LPERR07G16410 Leersia perrieri LPERR07G16410 N 0.751
OBART07G19080 Oryza barthii OBART07G19080 N 0.749
Pavir.Ba00637 Panicum virgatum Pavir.Ba00637 N 0.745
MLOC_62589 Hordeum vulgare MLOC_62589 N 0.734
Pavir.Bb03100 Panicum virgatum Pavir.Bb03100 N 0.732
Si032551m.g Setaria italica Si032551m.g N 0.729
fgenesh2_kg.7__3225__AT5G41920.1 Arabidopsis lyrata fgenesh2_kg.7__3225__AT5G41920.1 N 0.727
GRMZM2G106548 Zea mays GRMZM2G106548 N 0.727
SCL23 Arabidopsis thaliana AT5G41920 N 0.727
Carubv10004949m.g Capsella rubella Carubv10004949m.g N 0.716
Cagra.6263s0002 Capsella grandiflora Cagra.6263s0002 N 0.715
Bostr.17016s0016 Boechera stricta Bostr.17016s0016 N 0.713
Bostr.25375s0003 Boechera stricta Bostr.25375s0003 N 0.706
BRADI1G24310 Brachypodium distachyon BRADI1G24310 N 0.704
Thhalv10027784m.g Eutrema salsugineum Thhalv10027784m.g N 0.704