Gorai.006G125700 (Gossypium raimondii)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Gorai.006G125700 T202631_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.006G125700.1 GRAS 47 469

Links

Other GRAS family TFs
Other Gossypium raimondii TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_040833 Theobroma cacao TCM_040833 N 0.921
SCL3 Populus trichocarpa POPTR_0009s05330 N 0.860
30024.m001746 Ricinus communis 30024.m001746 N 0.860
evm.TU.supercontig_84.12 Carica papaya evm.TU.supercontig_84.12 N 0.860
SCL3 Vitis vinifera VIT_06s0009g02390 N 0.858
Ca_27441 Cicer arietinum Ca_27441 N 0.852
Ciclev10015219m.g Citrus clementina Ciclev10015219m.g N 0.851
cassava13860.valid.m1 Manihot esculenta cassava13860.valid.m1 N 0.849
Pm012190 Prunus mume Pm012190 N 0.847
chr2.CM0018.90.nc Lotus japonicus chr2.CM0018.90.nc N 0.847
orange1.1g014413m.g Citrus sinensis orange1.1g014413m.g N 0.847
cassava31043.valid.m1 Manihot esculenta cassava31043.valid.m1 N 0.845
PRUPE_ppa005243mg Prunus persica PRUPE_ppa005243mg N 0.844
MTR_5g009080 Medicago truncatula MTR_5g009080 N 0.844
chr3.CM0460.90.nd Lotus japonicus chr3.CM0460.90.nd N 0.841
SapurV1A.0415s0050 Salix purpurea SapurV1A.0415s0050 N 0.838
Ca_11133 Cicer arietinum Ca_11133 N 0.830
PGSC0003DMG400004649 Solanum tuberosum PGSC0003DMG400004649 N 0.830
Solyc12g099900.1 Solanum lycopersicum Solyc12g099900.1 N 0.825
Eucgr.B03716 Eucalyptus grandis Eucgr.B03716 N 0.819
Gorai.013G252600 Gossypium raimondii Gorai.013G252600 N 0.815
GLYMA11G10170 Glycine max GLYMA11G10170 N 0.814
TCM_042392 Theobroma cacao TCM_042392 N 0.803
GLYMA12G02490 Glycine max GLYMA12G02490 N 0.795
Cagra.0860s0005 Capsella grandiflora Cagra.0860s0005 N 0.792
Cla006433 Citrullus lanatus Cla006433 N 0.792
cassava1376.valid.m1 Manihot esculenta cassava1376.valid.m1 N 0.791
cassava1375.valid.m1 Manihot esculenta cassava1375.valid.m1 N 0.791
Carubv10008999m.g Capsella rubella Carubv10008999m.g N 0.789
Thhalv10011447m.g Eutrema salsugineum Thhalv10011447m.g N 0.789
SCL3 Arabidopsis lyrata fgenesh2_kg.1__4122__AT1G50420.1 N 0.786
Cucsa.055340 Cucumis sativus Cucsa.055340 N 0.786
MTR_4g076140 Medicago truncatula MTR_4g076140 N 0.786
POPTR_0001s06090 Populus trichocarpa POPTR_0001s06090 N 0.784
PGSC0003DMG400022709 Solanum tuberosum PGSC0003DMG400022709 N 0.784
30131.m007244 Ricinus communis 30131.m007244 N 0.784
SCL3 Arabidopsis thaliana AT1G50420 N 0.784
Gorai.012G080500 Gossypium raimondii Gorai.012G080500 N 0.784
VIT_13s0019g01220 Vitis vinifera VIT_13s0019g01220 N 0.782
Bostr.26675s0133 Boechera stricta Bostr.26675s0133 N 0.780
SapurV1A.0009s0760 Salix purpurea SapurV1A.0009s0760 N 0.778
orange1.1g011736m.g Citrus sinensis orange1.1g011736m.g N 0.776
SapurV1A.0504s0280 Salix purpurea SapurV1A.0504s0280 N 0.775
Bo3g179450 Brassica oleracea Bo3g179450 N 0.775
POPTR_0003s20100 Populus trichocarpa POPTR_0003s20100 N 0.775
Bo5g078760 Brassica oleracea Bo5g078760 N 0.774
evm.TU.supercontig_197.7 Carica papaya evm.TU.supercontig_197.7 N 0.774
Gorai.013G015100 Gossypium raimondii Gorai.013G015100 N 0.774
Lus10022418.g Linum usitatissimum Lus10022418.g N 0.773
Lus10009717.g Linum usitatissimum Lus10009717.g N 0.773
Ciclev10031389m.g Citrus clementina Ciclev10031389m.g N 0.773
Bra014251 Brassica rapa Bra014251 N 0.772
Bra018848 Brassica rapa Bra018848 N 0.770
Solyc01g008910.2 Solanum lycopersicum Solyc01g008910.2 N 0.769
PRUPE_ppa005439mg Prunus persica PRUPE_ppa005439mg N 0.767
Pm029840 Prunus mume Pm029840 N 0.767
Aquca_014_00674 Aquilegia coerulea Aquca_014_00674 N 0.767
Pm016466 Prunus mume Pm016466 N 0.767
Eucgr.G03258 Eucalyptus grandis Eucgr.G03258 N 0.764
GLYMA01G43620 Glycine max GLYMA01G43620 N 0.753
PK02707.1 Cannabis sativa PK02707.1 N 0.751
cassava20989.m1 Manihot esculenta cassava20989.m1 N 0.751
Bo6g022200 Brassica oleracea Bo6g022200 N 0.748
Cucsa.308180 Cucumis sativus Cucsa.308180 N 0.741
GLYMA11G01850 Glycine max GLYMA11G01850 N 0.740
mgf022906m Mimulus guttatus mgf022906m N 0.740
mgf008315m Mimulus guttatus mgf008315m N 0.736
Cla020893 Citrullus lanatus Cla020893 N 0.734
gene14438-v1.0-hybrid Fragaria vesca gene14438-v1.0-hybrid N 0.730
Lus10039562.g Linum usitatissimum Lus10039562.g N 0.723
Lus10024177.g Linum usitatissimum Lus10024177.g N 0.719
Lus10019773.g Linum usitatissimum Lus10019773.g N 0.701