CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.008G106000
(
Gossypium raimondii
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Gorai.008G106000
T202645_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.008G106000.1
GRAS
340
697
IIDQLIQAAELIETGDPVLAQGILARLNHQLSPVGKPFIRAAFYFKEALQLLLPLNTSNTSVMSNYNMIFKIGAYKSFSEISPIVQFANFTCNQALLEVFEGCNRVHIIDFDVGYGGQWASLIQELVLRNGGAPSMKITAFASPSSHDDIELGFTIENLKHYASEINMDFDIEIMSLEALNSGSWPLPLHLGENEAIAVNLPIGSFSNYPSILPLVLRFVKQLSPKIVVSLDRGCDRTDVPFPHHIIHALQSYSGLLESLDAVNMNLDALEKIERFFLQPSIEKIVLGRHRSLERRPPWRSLFIQSGFSPLTFSNFTESQAECLIQRTPIRGFHVEKRQSSLVLCWQRRELIAASAWR
Links
Other
GRAS
family TFs
Other
Gossypium raimondii
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_005571
Theobroma cacao
TCM_005571
N
0.891
Gorai.008G106100
Gossypium raimondii
Gorai.008G106100
N
0.877
evm.TU.supercontig_49.157
Carica papaya
evm.TU.supercontig_49.157
N
0.797
POPTR_0002s14550
Populus trichocarpa
POPTR_0002s14550
N
0.756
SapurV1A.0033s0490
Salix purpurea
SapurV1A.0033s0490
N
0.753
Ciclev10019083m.g
Citrus clementina
Ciclev10019083m.g
N
0.751
orange1.1g005237m.g
Citrus sinensis
orange1.1g005237m.g
N
0.751
orange1.1g005326m.g
Citrus sinensis
orange1.1g005326m.g
N
0.746
Ciclev10019094m.g
Citrus clementina
Ciclev10019094m.g
N
0.746
VIT_15s0048g00270
Vitis vinifera
VIT_15s0048g00270
N
0.740
SapurV1A.0033s0460
Salix purpurea
SapurV1A.0033s0460
N
0.730
30174.m008828
Ricinus communis
30174.m008828
N
0.728
POPTR_0014s05910
Populus trichocarpa
POPTR_0014s05910
N
0.725
PGSC0003DMG400025973
Solanum tuberosum
PGSC0003DMG400025973
N
0.724
POPTR_0002s14500
Populus trichocarpa
POPTR_0002s14500
N
0.722
PK17954.1
Cannabis sativa
PK17954.1
N
0.722
Solyc01g090950.2
Solanum lycopersicum
Solyc01g090950.2
N
0.721
SapurV1A.0248s0400
Salix purpurea
SapurV1A.0248s0400
N
0.720
POPTR_0014s05940
Populus trichocarpa
POPTR_0014s05940
N
0.720
cassava19916.m1
Manihot esculenta
cassava19916.m1
N
0.717
Eucgr.E01510
Eucalyptus grandis
Eucgr.E01510
N
0.714
SapurV1A.0382s0350
Salix purpurea
SapurV1A.0382s0350
N
0.714
SapurV1A.1971s0010
Salix purpurea
SapurV1A.1971s0010
N
0.714