CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.011G140300
(
Gossypium raimondii
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Gorai.011G140300
T202666_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.011G140300.1
GRAS
103
476
ASRLLKECARAISDKDSSKIHHLLWMLNELASPYGDCEQKLASYFLQALFCKATESGQRCFKTLTLVAEKSHCFDSARKLILKFQEVSPWTTFGHVAANGAILEALDGEPKLHIIDISNTLCTQWPTLLEALATRNDDTPHLKLTVVVTANIVRSVMKEISQRMEKFARLMGVPFEFNVISGLNHLGQLTKDALGVVEDEAVAVNCMGALRGVPVEERAAVIGMFRSLGPKVVTVVEEEADFSRTRDDFVKCFEECLRFYTVYFEMLEESFNPTSNEKLMLERECSRGIVRVLACDDDQDNEGERERRERGSQWSERLKEAFSPVGFSDDVVDDVKALLKRYKPGWALAQPDQNETGLYLTWKEEPVVWVSAWK
Links
Other
GRAS
family TFs
Other
Gossypium raimondii
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Gorai.011G140100
Gossypium raimondii
Gorai.011G140100
N
0.978
TCM_019978
Theobroma cacao
TCM_019978
N
0.898
POPTR_0007s01650
Populus trichocarpa
POPTR_0007s01650
N
0.860
POPTR_0017s05450
Populus trichocarpa
POPTR_0017s05450
N
0.854
Ciclev10020072m.g
Citrus clementina
Ciclev10020072m.g
N
0.854
PRUPE_ppa1027119mg
Prunus persica
PRUPE_ppa1027119mg
N
0.846
Pm007259
Prunus mume
Pm007259
N
0.846
PK11022.1
Cannabis sativa
PK11022.1
N
0.844
SapurV1A.1357s0040
Salix purpurea
SapurV1A.1357s0040
N
0.838
VIT_00s0226g00070
Vitis vinifera
VIT_00s0226g00070
N
0.838
SapurV1A.1272s0060
Salix purpurea
SapurV1A.1272s0060
N
0.835
SapurV1A.0791s0060
Salix purpurea
SapurV1A.0791s0060
N
0.835
cassava11920.valid.m1
Manihot esculenta
cassava11920.valid.m1
N
0.830
Eucgr.A00109
Eucalyptus grandis
Eucgr.A00109
N
0.799
evm.TU.supercontig_9.323
Carica papaya
evm.TU.supercontig_9.323
N
0.788
GLYMA13G42100
Glycine max
GLYMA13G42100
N
0.778
Ca_02696
Cicer arietinum
Ca_02696
N
0.775
GLYMA15G03290
Glycine max
GLYMA15G03290
N
0.772
chr3.CM0106.470.nd
Lotus japonicus
chr3.CM0106.470.nd
N
0.772
SapurV1A.0485s0200
Salix purpurea
SapurV1A.0485s0200
N
0.766
MTR_2g099110
Medicago truncatula
MTR_2g099110
N
0.761
Cla007135
Citrullus lanatus
Cla007135
N
0.761
Aquca_058_00064
Aquilegia coerulea
Aquca_058_00064
N
0.755
PGSC0003DMG400014615
Solanum tuberosum
PGSC0003DMG400014615
N
0.755
Solyc08g014030.1
Solanum lycopersicum
Solyc08g014030.1
N
0.755
Cucsa.362140
Cucumis sativus
Cucsa.362140
N
0.734
mgf025327m
Mimulus guttatus
mgf025327m
N
0.728
GSMUA_Achr6G21350_001
Musa acuminata
GSMUA_Achr6G21350_001
N
0.725
GSMUA_Achr9G02380_001
Musa acuminata
GSMUA_Achr9G02380_001
N
0.717
orange1.1g047247m.g
Citrus sinensis
orange1.1g047247m.g
N
0.714