CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10016521.g
(
Linum usitatissimum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Lus10016521.g
T202710_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10016521
GRAS
387
760
LRTLLSTCAQAISTDDRRTANELMRQIRQHSSPFGDGSQRLAHCFANALEARLAGNGTQIYIALSADKTSAADMLKAYQAYITACPFNKVAIIFANQSIMHAASDANASTVHIIDFGILYGFQWPAFIHRLSKRPGGPPTLRITGIELPQSGFRPGERVQATGRRLAKYCERHNVPFEYNAIAKKWENIQLDELKINKGEFLAVNCLFRGKNLLDETVLVSSPRDAVLRLIRMKNPDIFVHAIMNGSYNAPFFMTRFRESLFHFSSLFDMLDTNMGREDQMRMKFEKEFYGREAINVMACEGSERVERPETYKQWQVRSTRAGMKQLPLDPVMMKRLKCKVRVKYHEDFVVNEDGEWLLQGWKGRVIYASSAWI
Links
Other
GRAS
family TFs
Other
Linum usitatissimum
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Lus10040790.g
Linum usitatissimum
Lus10040790.g
N
0.954
SapurV1A.4599s0010
Salix purpurea
SapurV1A.4599s0010
N
0.797
28650.m000191
Ricinus communis
28650.m000191
N
0.795
SapurV1A.0040s0470
Salix purpurea
SapurV1A.0040s0470
N
0.792
POPTR_0009s03790
Populus trichocarpa
POPTR_0009s03790
N
0.792
cassava19450.valid.m1
Manihot esculenta
cassava19450.valid.m1
N
0.786
SapurV1A.0041s0160
Salix purpurea
SapurV1A.0041s0160
N
0.776
POPTR_0001s24850
Populus trichocarpa
POPTR_0001s24850
N
0.773
Pm000719
Prunus mume
Pm000719
N
0.757
PRUPE_ppa003149mg
Prunus persica
PRUPE_ppa003149mg
N
0.757
TCM_041815
Theobroma cacao
TCM_041815
N
0.714
evm.TU.supercontig_81.126
Carica papaya
evm.TU.supercontig_81.126
N
0.703
Thhalv10006868m.g
Eutrema salsugineum
Thhalv10006868m.g
N
0.700
Traes_4DS_050789E2A
Triticum aestivum
Traes_4DS_050789E2A
N
0.700
Bo01118s010
Brassica oleracea
Bo01118s010
N
0.700