MDP0000237978 (Malus domestica)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 MDP0000237978 T202830_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000237978 GRAS 268 627

Links

Other GRAS family TFs
Other Malus domestica TFs

74 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pm006304 Prunus mume Pm006304 N 0.952
PRUPE_ppa005944mg Prunus persica PRUPE_ppa005944mg N 0.947
evm.TU.supercontig_2.240 Carica papaya evm.TU.supercontig_2.240 I 0.862
PK14700.1 Cannabis sativa PK14700.1 N 0.852
cassava15077.m1 Manihot esculenta cassava15077.m1 N 0.849
POPTR_0008s13090 Populus trichocarpa POPTR_0008s13090 N 0.840
29692.m000540 Ricinus communis 29692.m000540 N 0.840
TCM_010965 Theobroma cacao TCM_010965 N 0.835
SapurV1A.0015s0210 Salix purpurea SapurV1A.0015s0210 N 0.832
cassava14484.m1 Manihot esculenta cassava14484.m1 N 0.832
SapurV1A.0405s0090 Salix purpurea SapurV1A.0405s0090 N 0.829
POPTR_0010s12080 Populus trichocarpa POPTR_0010s12080 N 0.829
Gorai.002G177000 Gossypium raimondii Gorai.002G177000 N 0.824
Eucgr.G02163 Eucalyptus grandis Eucgr.G02163 N 0.824
Cla003996 Citrullus lanatus Cla003996 N 0.821
Cucsa.280310 Cucumis sativus Cucsa.280310 N 0.818
Ca_05046 Cicer arietinum Ca_05046 N 0.815
Cagra.2235s0013 Capsella grandiflora Cagra.2235s0013 N 0.807
Bostr.7903s0021 Boechera stricta Bostr.7903s0021 N 0.804
GLYMA05G27190 Glycine max GLYMA05G27190 N 0.803
Thhalv10005482m.g Eutrema salsugineum Thhalv10005482m.g N 0.802
GAI1 Vitis vinifera VIT_01s0011g05260 N 0.800
RGA Arabidopsis thaliana AT2G01570 N 0.796
Bo7g078550 Brassica oleracea Bo7g078550 N 0.796
GLYMA08G10140 Glycine max GLYMA08G10140 N 0.794
Bra024875 Brassica rapa Bra024875 N 0.793
Thhalv10007323m.g Eutrema salsugineum Thhalv10007323m.g N 0.790
Carubv10008833m.g Capsella rubella Carubv10008833m.g N 0.790
Cagra.3501s0003 Capsella grandiflora Cagra.3501s0003 N 0.790
RGA1 Arabidopsis lyrata fgenesh2_kg.5__65__AT2G01570.1 N 0.788
Carubv10018534m.g Capsella rubella Carubv10018534m.g N 0.787
Lus10009133.g Linum usitatissimum Lus10009133.g N 0.783
Bostr.7128s0107 Boechera stricta Bostr.7128s0107 N 0.782
GAI Arabidopsis thaliana AT1G14920 N 0.782
GAI Arabidopsis lyrata fgenesh2_kg.1__1634__AT1G14920.1 N 0.779
AMTR_s00010p00148880 Amborella trichopoda AMTR_s00010p00148880 N 0.774
orange1.1g043131m.g Citrus sinensis orange1.1g043131m.g N 0.773
Ciclev10017466m.g Citrus clementina Ciclev10017466m.g N 0.769
Pm014329 Prunus mume Pm014329 I 0.768
mgf008289m Mimulus guttatus mgf008289m N 0.767
PRUPE_ppa003206mg Prunus persica PRUPE_ppa003206mg I 0.760
MDP0000669451 Malus domestica MDP0000669451 I 0.760
Solyc11g011260.1 Solanum lycopersicum Solyc11g011260.1 N 0.759
PGSC0003DMG400015692 Solanum tuberosum PGSC0003DMG400015692 N 0.759
Eucgr.J01594 Eucalyptus grandis Eucgr.J01594 I 0.759
VIT_14s0006g00640 Vitis vinifera VIT_14s0006g00640 I 0.756
POPTR_0004s08890 Populus trichocarpa POPTR_0004s08890 I 0.753
POPTR_0005s14540 Populus trichocarpa POPTR_0005s14540 I 0.753
Gorai.001G089400 Gossypium raimondii Gorai.001G089400 I 0.753
cassava6237.valid.m1 Manihot esculenta cassava6237.valid.m1 I 0.750
evm.TU.supercontig_116.43 Carica papaya evm.TU.supercontig_116.43 I 0.748
mgf025772m Mimulus guttatus mgf025772m N 0.748
SapurV1A.0102s0220 Salix purpurea SapurV1A.0102s0220 N 0.747
Cla020062 Citrullus lanatus Cla020062 N 0.745
28677.m000055 Ricinus communis 28677.m000055 N 0.744
Ciclev10011367m.g Citrus clementina Ciclev10011367m.g N 0.739
Ca_13295 Cicer arietinum Ca_13295 I 0.739
orange1.1g008153m.g Citrus sinensis orange1.1g008153m.g N 0.739
TCM_019165 Theobroma cacao TCM_019165 N 0.737
Aquca_091_00032 Aquilegia coerulea Aquca_091_00032 N 0.734
F775_03572 Aegilops tauschii F775_03572 N 0.731
Cucsa.006260 Cucumis sativus Cucsa.006260 N 0.731
Lus10017626.g Linum usitatissimum Lus10017626.g N 0.728
GLYMA18G04500 Glycine max GLYMA18G04500 I 0.728
LjT15P09.140.nc Lotus japonicus LjT15P09.140.nc N 0.727
MTR_3g065980 Medicago truncatula MTR_3g065980 N 0.727
LjT40K11.90.nc Lotus japonicus LjT40K11.90.nc N 0.727
Bo9g070200 Brassica oleracea Bo9g070200 N 0.723
Lus10033583.g Linum usitatissimum Lus10033583.g N 0.723
GLYMA11G33720 Glycine max GLYMA11G33720 I 0.720
AMTR_s00012p00140480 Amborella trichopoda AMTR_s00012p00140480 N 0.709
RGL2 Arabidopsis lyrata fgenesh2_kg.3__292__AT3G03450.1 I 0.706
GRMZM2G144744 Zea mays GRMZM2G144744 N 0.700
SLR1 Oryza sativa OS03G0707600 N 0.700