MDP0000727836 (Malus domestica)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 MDP0000727836 T202899_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000727836 GRAS 209 579

Links

Other GRAS family TFs
Other Malus domestica TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000859087 Malus domestica MDP0000859087 N 0.957
PRUPE_ppa003310mg Prunus persica PRUPE_ppa003310mg N 0.908
Pm022704 Prunus mume Pm022704 N 0.900
gene01015-v1.0-hybrid Fragaria vesca gene01015-v1.0-hybrid N 0.867
orange1.1g007853m.g Citrus sinensis orange1.1g007853m.g N 0.835
Ciclev10000671m.g Citrus clementina Ciclev10000671m.g N 0.835
TCM_035362 Theobroma cacao TCM_035362 N 0.832
cassava26784.m1 Manihot esculenta cassava26784.m1 N 0.824
Gorai.009G251800 Gossypium raimondii Gorai.009G251800 N 0.821
POPTR_0002s07430 Populus trichocarpa POPTR_0002s07430 N 0.816
MTR_1g029420 Medicago truncatula MTR_1g029420 N 0.816
evm.TU.supercontig_26.96 Carica papaya evm.TU.supercontig_26.96 N 0.815
Gorai.005G083700 Gossypium raimondii Gorai.005G083700 N 0.813
SapurV1A.0267s0240 Salix purpurea SapurV1A.0267s0240 N 0.813
POPTR_0005s20890 Populus trichocarpa POPTR_0005s20890 N 0.810
29648.m001919 Ricinus communis 29648.m001919 N 0.810
GLYMA06G12701 Glycine max GLYMA06G12701 N 0.808
cassava42388.valid.m1 Manihot esculenta cassava42388.valid.m1 N 0.808
PK29476.1 Cannabis sativa PK29476.1 N 0.808
GLYMA04G42090 Glycine max GLYMA04G42090 N 0.802
SapurV1A.0261s0120 Salix purpurea SapurV1A.0261s0120 N 0.799
MTR_3g089055 Medicago truncatula MTR_3g089055 N 0.791
Eucgr.F04276 Eucalyptus grandis Eucgr.F04276 N 0.791
Aquca_014_00370 Aquilegia coerulea Aquca_014_00370 N 0.791
Cucsa.079150 Cucumis sativus Cucsa.079150 N 0.786
Ca_03920 Cicer arietinum Ca_03920 N 0.780
GLYMA13G09220 Glycine max GLYMA13G09220 N 0.778
VIT_04s0044g01370 Vitis vinifera VIT_04s0044g01370 N 0.772
GLYMA14G27290 Glycine max GLYMA14G27290 N 0.772
Cla015267 Citrullus lanatus Cla015267 N 0.772
SCL1 Vitis vinifera VIT_18s0001g15270 N 0.770
Lus10042776.g Linum usitatissimum Lus10042776.g N 0.767
Bo5g034360 Brassica oleracea Bo5g034360 N 0.764
Lus10029747.g Linum usitatissimum Lus10029747.g N 0.762
SCL1 Arabidopsis lyrata fgenesh2_kg.1__2335__AT1G21450.1 N 0.759
GSMUA_Achr10G17290_001 Musa acuminata GSMUA_Achr10G17290_001 N 0.759
Bra017915 Brassica rapa Bra017915 N 0.756
GSMUA_Achr3G02410_001 Musa acuminata GSMUA_Achr3G02410_001 N 0.753
SCL1 Arabidopsis thaliana AT1G21450 N 0.751
Solyc04g064550.1 Solanum lycopersicum Solyc04g064550.1 N 0.751
AMTR_s00186p00018500 Amborella trichopoda AMTR_s00186p00018500 N 0.748
PGSC0003DMG400024853 Solanum tuberosum PGSC0003DMG400024853 N 0.748
Thhalv10007142m.g Eutrema salsugineum Thhalv10007142m.g N 0.745
Bo7g059410 Brassica oleracea Bo7g059410 N 0.743
Carubv10008658m.g Capsella rubella Carubv10008658m.g N 0.741
Bra012280 Brassica rapa Bra012280 N 0.740
Cagra.1632s0036 Capsella grandiflora Cagra.1632s0036 N 0.740
Bostr.25570s0024 Boechera stricta Bostr.25570s0024 N 0.737
mgf010500m Mimulus guttatus mgf010500m N 0.734
OPUNC01G38160 Oryza punctata OPUNC01G38160 N 0.715
OB01G48180 Oryza brachyantha OB01G48180 N 0.713
ORGLA01G0333300 Oryza glaberrima ORGLA01G0333300 N 0.713
OGLUM01G43650 Oryza glumaepatula OGLUM01G43650 N 0.713
OBART01G39420 Oryza barthii OBART01G39420 N 0.713
OMERI01G36330 Oryza meridionalis OMERI01G36330 N 0.713
OLONG_003002 Oryza longistaminata OLONG_003002 N 0.713
ORUFI01G42800 Oryza rufipogon ORUFI01G42800 N 0.710
ONIVA01G44280 Oryza nivara ONIVA01G44280 N 0.710
OS01G0881500 Oryza sativa OS01G0881500 N 0.710
LPERR01G33950 Leersia perrieri LPERR01G33950 N 0.705