MDP0000804652 (Malus domestica)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 MDP0000804652 T202904_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000804652 GRAS 177 547

Links

Other GRAS family TFs
Other Malus domestica TFs

125 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pm015021 Prunus mume Pm015021 N 0.957
MDP0000152670 Malus domestica MDP0000152670 N 0.954
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.951
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.932
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.894
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.889
TCM_002319 Theobroma cacao TCM_002319 N 0.889
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.883
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.883
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.878
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.873
cassava34106.m1 Manihot esculenta cassava34106.m1 N 0.872
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.870
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.867
cassava8885.m1 Manihot esculenta cassava8885.m1 N 0.862
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.862
29949.m000124 Ricinus communis 29949.m000124 N 0.860
Ca_09786 Cicer arietinum Ca_09786 N 0.856
Cla001429 Citrullus lanatus Cla001429 N 0.854
Bo9g009240 Brassica oleracea Bo9g009240 N 0.850
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.848
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.848
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.846
Ciclev10014845m.g Citrus clementina Ciclev10014845m.g N 0.846
PK09018.1 Cannabis sativa PK09018.1 N 0.837
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.827
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.827
PAT1 Arabidopsis thaliana AT5G48150 N 0.824
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N 0.816
Carubv10026289m.g Capsella rubella Carubv10026289m.g N 0.816
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.816
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.816
27613.m000642 Ricinus communis 27613.m000642 N 0.816
Lus10012323.g Linum usitatissimum Lus10012323.g N 0.814
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.813
Lus10006369.g Linum usitatissimum Lus10006369.g N 0.812
PAT1 Arabidopsis lyrata scaffold_801100.1 N 0.810
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N 0.810
Bo9g009260 Brassica oleracea Bo9g009260 N 0.810
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.802
Bra036185 Brassica rapa Bra036185 N 0.802
Bra020715 Brassica rapa Bra020715 N 0.802
Bo2g149670 Brassica oleracea Bo2g149670 N 0.799
Pm012019 Prunus mume Pm012019 N 0.797
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N 0.793
TCM_030733 Theobroma cacao TCM_030733 N 0.791
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N 0.791
SapurV1A.0030s0420 Salix purpurea SapurV1A.0030s0420 N 0.789
Bo7g089080 Brassica oleracea Bo7g089080 N 0.784
Thhalv10004053m.g Eutrema salsugineum Thhalv10004053m.g N 0.784
Bra037509 Brassica rapa Bra037509 N 0.781
Aquca_028_00248 Aquilegia coerulea Aquca_028_00248 N 0.780
SCL5 Populus trichocarpa POPTR_0001s37270 N 0.780
MDP0000284679 Malus domestica MDP0000284679 N 0.772
MDP0000205236 Malus domestica MDP0000205236 N 0.772
Lus10003772.g Linum usitatissimum Lus10003772.g N 0.772
Gorai.002G096300 Gossypium raimondii Gorai.002G096300 N 0.770
Solyc07g065270.1 Solanum lycopersicum Solyc07g065270.1 N 0.770
Lus10016596.g Linum usitatissimum Lus10016596.g N 0.768
Gorai.009G446100 Gossypium raimondii Gorai.009G446100 N 0.767
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N 0.767
PGSC0003DMG400022187 Solanum tuberosum PGSC0003DMG400022187 N 0.764
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.762
LjSGA_018703.2 Lotus japonicus LjSGA_018703.2 N 0.755
PK15082.1 Cannabis sativa PK15082.1 N 0.751
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N 0.748
AMTR_s00088p00161000 Amborella trichopoda AMTR_s00088p00161000 N 0.745
Bra026077 Brassica rapa Bra026077 N 0.743
SCL5 Arabidopsis lyrata fgenesh2_kg.1__4145__AT1G50600.1 N 0.740
SCL5 Arabidopsis thaliana AT1G50600 N 0.740
Eucgr.F03523 Eucalyptus grandis Eucgr.F03523 N 0.737
GSMUA_Achr8G03610_001 Musa acuminata GSMUA_Achr8G03610_001 N 0.736
Thhalv10002541m.g Eutrema salsugineum Thhalv10002541m.g N 0.736
Bra018860 Brassica rapa Bra018860 N 0.734
Bo6g022330 Brassica oleracea Bo6g022330 N 0.734
Bostr.19424s0023 Boechera stricta Bostr.19424s0023 N 0.734
Ca_13855 Cicer arietinum Ca_13855 N 0.734
Bostr.26675s0117 Boechera stricta Bostr.26675s0117 N 0.734
SCL21 Arabidopsis thaliana AT2G04890 N 0.731
CIGR2 Oryza sativa OS07G0583600 N 0.730
SCL21 Arabidopsis lyrata scaffold_303269.1 N 0.728
Carubv10008830m.g Capsella rubella Carubv10008830m.g N 0.726
Cagra.7055s0004 Capsella grandiflora Cagra.7055s0004 N 0.726
Cla004565 Citrullus lanatus Cla004565 N 0.724
SCL13 Vitis vinifera VIT_00s0463g00020 N 0.724
Thhalv10011379m.g Eutrema salsugineum Thhalv10011379m.g N 0.724
PDK_20s1421311g003 Phoenix dactylifera PDK_20s1421311g003 N 0.719
Bo7g030310 Brassica oleracea Bo7g030310 N 0.717
Bra015156 Brassica rapa Bra015156 N 0.717
mgf013039m Mimulus guttatus mgf013039m N 0.716
Carubv10015685m.g Capsella rubella Carubv10015685m.g N 0.714
MTR_3g056110 Medicago truncatula MTR_3g056110 N 0.713
GLYMA02G46730 Glycine max GLYMA02G46730 N 0.713
chr6.LjT11E14.20.nc Lotus japonicus chr6.LjT11E14.20.nc N 0.710
Traes_2BS_D007D6598 Triticum aestivum Traes_2BS_D007D6598 N 0.710
OPUNC07G19030 Oryza punctata OPUNC07G19030 N 0.710
OMERI07G16830 Oryza meridionalis OMERI07G16830 N 0.710
OMERI10G05450 Oryza meridionalis OMERI10G05450 N 0.710
GLYMA14G01960 Glycine max GLYMA14G01960 N 0.710
Cagra.1158s0007 Capsella grandiflora Cagra.1158s0007 N 0.709
BRADI1G23350 Brachypodium distachyon BRADI1G23350 N 0.707
BGIOSGA026022 Oryza indica BGIOSGA026022 N 0.707
OGLUM07G19910 Oryza glumaepatula OGLUM07G19910 N 0.707
OBART10G07700 Oryza barthii OBART10G07700 N 0.707
F775_15940 Aegilops tauschii F775_15940 N 0.707
OGLUM10G07400 Oryza glumaepatula OGLUM10G07400 N 0.707
ORGLA10G0063900 Oryza glaberrima ORGLA10G0063900 N 0.707
ORUFI10G08100 Oryza rufipogon ORUFI10G08100 N 0.707
ORUFI07G20980 Oryza rufipogon ORUFI07G20980 N 0.707
ORGLA07G0258500 Oryza glaberrima ORGLA07G0258500 N 0.707
Traes_5DL_B89CD8432 Triticum aestivum Traes_5DL_B89CD8432 N 0.707
ONIVA07G18570 Oryza nivara ONIVA07G18570 N 0.707
Cucsa.042310 Cucumis sativus Cucsa.042310 N 0.707
BGIOSGA032058 Oryza indica BGIOSGA032058 N 0.705
OB07G25870 Oryza brachyantha OB07G25870 N 0.705
OLONG_015869 Oryza longistaminata OLONG_015869 N 0.705
OBART07G20130 Oryza barthii OBART07G20130 N 0.705
OPUNC10G06730 Oryza punctata OPUNC10G06730 N 0.702
ONIVA10G07150 Oryza nivara ONIVA10G07150 N 0.702
GLYMA08G43780 Glycine max GLYMA08G43780 N 0.702
LPERR07G17460 Leersia perrieri LPERR07G17460 N 0.702
GRMZM2G431309 Zea mays GRMZM2G431309 N 0.702
Pavir.Ba00562 Panicum virgatum Pavir.Ba00562 N 0.702
MLOC_65838 Hordeum vulgare MLOC_65838 N 0.702
Traes_5BL_A7C4DAE11 Triticum aestivum Traes_5BL_A7C4DAE11 N 0.701