MDP0000859087 (Malus domestica)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 MDP0000859087 T202913_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000859087 GRAS 198 568

Links

Other GRAS family TFs
Other Malus domestica TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000727836 Malus domestica MDP0000727836 N 0.957
PRUPE_ppa003310mg Prunus persica PRUPE_ppa003310mg N 0.908
Pm022704 Prunus mume Pm022704 N 0.902
gene01015-v1.0-hybrid Fragaria vesca gene01015-v1.0-hybrid N 0.867
Ciclev10000671m.g Citrus clementina Ciclev10000671m.g N 0.840
orange1.1g007853m.g Citrus sinensis orange1.1g007853m.g N 0.840
TCM_035362 Theobroma cacao TCM_035362 N 0.832
Gorai.009G251800 Gossypium raimondii Gorai.009G251800 N 0.824
cassava26784.m1 Manihot esculenta cassava26784.m1 N 0.824
evm.TU.supercontig_26.96 Carica papaya evm.TU.supercontig_26.96 N 0.821
MTR_1g029420 Medicago truncatula MTR_1g029420 N 0.816
POPTR_0002s07430 Populus trichocarpa POPTR_0002s07430 N 0.813
PK29476.1 Cannabis sativa PK29476.1 N 0.810
SapurV1A.0267s0240 Salix purpurea SapurV1A.0267s0240 N 0.810
GLYMA06G12701 Glycine max GLYMA06G12701 N 0.810
29648.m001919 Ricinus communis 29648.m001919 N 0.810
cassava42388.valid.m1 Manihot esculenta cassava42388.valid.m1 N 0.805
POPTR_0005s20890 Populus trichocarpa POPTR_0005s20890 N 0.805
Gorai.005G083700 Gossypium raimondii Gorai.005G083700 N 0.805
Aquca_014_00370 Aquilegia coerulea Aquca_014_00370 N 0.799
GLYMA04G42090 Glycine max GLYMA04G42090 N 0.799
Eucgr.F04276 Eucalyptus grandis Eucgr.F04276 N 0.797
SapurV1A.0261s0120 Salix purpurea SapurV1A.0261s0120 N 0.794
MTR_3g089055 Medicago truncatula MTR_3g089055 N 0.794
GLYMA13G09220 Glycine max GLYMA13G09220 N 0.791
GLYMA14G27290 Glycine max GLYMA14G27290 N 0.784
SCL1 Vitis vinifera VIT_18s0001g15270 N 0.778
Ca_03920 Cicer arietinum Ca_03920 N 0.778
Cucsa.079150 Cucumis sativus Cucsa.079150 N 0.775
VIT_04s0044g01370 Vitis vinifera VIT_04s0044g01370 N 0.772
Bo5g034360 Brassica oleracea Bo5g034360 N 0.767
GSMUA_Achr10G17290_001 Musa acuminata GSMUA_Achr10G17290_001 N 0.767
Lus10042776.g Linum usitatissimum Lus10042776.g N 0.764
Cla015267 Citrullus lanatus Cla015267 N 0.764
GSMUA_Achr3G02410_001 Musa acuminata GSMUA_Achr3G02410_001 N 0.762
Bra017915 Brassica rapa Bra017915 N 0.759
Lus10029747.g Linum usitatissimum Lus10029747.g N 0.759
SCL1 Arabidopsis lyrata fgenesh2_kg.1__2335__AT1G21450.1 N 0.756
AMTR_s00186p00018500 Amborella trichopoda AMTR_s00186p00018500 N 0.753
PGSC0003DMG400024853 Solanum tuberosum PGSC0003DMG400024853 N 0.751
Solyc04g064550.1 Solanum lycopersicum Solyc04g064550.1 N 0.751
PDK_20s1392371g003 Phoenix dactylifera PDK_20s1392371g003 N 0.748
Thhalv10007142m.g Eutrema salsugineum Thhalv10007142m.g N 0.748
SCL1 Arabidopsis thaliana AT1G21450 N 0.746
mgf010500m Mimulus guttatus mgf010500m N 0.743
Bo7g059410 Brassica oleracea Bo7g059410 N 0.740
Carubv10008658m.g Capsella rubella Carubv10008658m.g N 0.738
Cagra.1632s0036 Capsella grandiflora Cagra.1632s0036 N 0.737
Bostr.25570s0024 Boechera stricta Bostr.25570s0024 N 0.734
Bra012280 Brassica rapa Bra012280 N 0.732
OPUNC01G38160 Oryza punctata OPUNC01G38160 N 0.729
OGLUM01G43650 Oryza glumaepatula OGLUM01G43650 N 0.726
ORGLA01G0333300 Oryza glaberrima ORGLA01G0333300 N 0.726
OBART01G39420 Oryza barthii OBART01G39420 N 0.726
OB01G48180 Oryza brachyantha OB01G48180 N 0.726
OMERI01G36330 Oryza meridionalis OMERI01G36330 N 0.726
ORUFI01G42800 Oryza rufipogon ORUFI01G42800 N 0.724
OLONG_003002 Oryza longistaminata OLONG_003002 N 0.724
ONIVA01G44280 Oryza nivara ONIVA01G44280 N 0.724
OS01G0881500 Oryza sativa OS01G0881500 N 0.721
LPERR01G33950 Leersia perrieri LPERR01G33950 N 0.718
GSMUA_Achr6G11780_001 Musa acuminata GSMUA_Achr6G11780_001 N 0.710
Sb03g041760 Sorghum bicolor Sb03g041760 N 0.707
BRADI2G56910 Brachypodium distachyon BRADI2G56910 N 0.707
F775_25916 Aegilops tauschii F775_25916 N 0.705
TRIUR3_26381 Triticum urartu TRIUR3_26381 N 0.705
Si000832m.g Setaria italica Si000832m.g N 0.705
TRAES3BF021600230CFD_g Triticum aestivum TRAES3BF021600230CFD_g N 0.705
Traes_3AL_6E16C8167 Triticum aestivum Traes_3AL_6E16C8167 N 0.705
MLOC_6971 Hordeum vulgare MLOC_6971 N 0.702