orange1.1g004514m.g (Citrus sinensis)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 orange1.1g004514m.g T202922_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g004514m GRAS 374 745
orange1.1g004524m GRAS 374 745

Links

Other GRAS family TFs
Other Citrus sinensis TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Ciclev10011141m.g Citrus clementina Ciclev10011141m.g N 0.997
POPTR_0006s08690 Populus trichocarpa POPTR_0006s08690 N 0.843
SapurV1A.0001s1700 Salix purpurea SapurV1A.0001s1700 N 0.841
Pm002685 Prunus mume Pm002685 N 0.822
PRUPE_ppa001883mg Prunus persica PRUPE_ppa001883mg N 0.822
TCM_021920 Theobroma cacao TCM_021920 N 0.819
VIT_08s0007g00510 Vitis vinifera VIT_08s0007g00510 N 0.808
Eucgr.A01279 Eucalyptus grandis Eucgr.A01279 N 0.805
cassava2361.valid.m1 Manihot esculenta cassava2361.valid.m1 N 0.795
29767.m000200 Ricinus communis 29767.m000200 N 0.794
gene18433-v1.0-hybrid Fragaria vesca gene18433-v1.0-hybrid N 0.783
Ca_21138 Cicer arietinum Ca_21138 N 0.776
Cucsa.175500 Cucumis sativus Cucsa.175500 N 0.773
GLYMA03G10320 Glycine max GLYMA03G10320 N 0.770
GLYMA07G15950 Glycine max GLYMA07G15950 N 0.770
Cla018179 Citrullus lanatus Cla018179 N 0.768
PGSC0003DMG400008904 Solanum tuberosum PGSC0003DMG400008904 N 0.765
MTR_7g062120 Medicago truncatula MTR_7g062120 N 0.765
Solyc09g010920.1 Solanum lycopersicum Solyc09g010920.1 N 0.762
PGSC0003DMG400019200 Solanum tuberosum PGSC0003DMG400019200 N 0.762
PK20526.1 Cannabis sativa PK20526.1 N 0.762
Lus10024384.g Linum usitatissimum Lus10024384.g N 0.762
GLYMA18G39920 Glycine max GLYMA18G39920 N 0.762
Gorai.007G376400 Gossypium raimondii Gorai.007G376400 N 0.749
Aquca_009_00954 Aquilegia coerulea Aquca_009_00954 N 0.743
Gorai.011G266200 Gossypium raimondii Gorai.011G266200 N 0.743
SCL9 Arabidopsis thaliana AT2G37650 N 0.741
Solyc10g086530.1 Solanum lycopersicum Solyc10g086530.1 N 0.741
mgf011165m Mimulus guttatus mgf011165m N 0.741
orange1.1g004488m.g Citrus sinensis orange1.1g004488m.g N 0.738
Ciclev10030787m.g Citrus clementina Ciclev10030787m.g N 0.738
Bostr.23794s0312 Boechera stricta Bostr.23794s0312 N 0.735
TCM_042705 Theobroma cacao TCM_042705 N 0.735
fgenesh1_pg.C_scaffold_4001848 Arabidopsis lyrata fgenesh1_pg.C_scaffold_4001848 N 0.734
cassava31335.valid.m1 Manihot esculenta cassava31335.valid.m1 N 0.732
Bo3g031890 Brassica oleracea Bo3g031890 N 0.730
Thhalv10016318m.g Eutrema salsugineum Thhalv10016318m.g N 0.730
Cagra.18121s0006 Capsella grandiflora Cagra.18121s0006 N 0.728
Carubv10025657m.g Capsella rubella Carubv10025657m.g N 0.728
Bra000012 Brassica rapa Bra000012 N 0.727
27568.m000253 Ricinus communis 27568.m000253 N 0.722
Gorai.010G201000 Gossypium raimondii Gorai.010G201000 N 0.719
mgf014897m Mimulus guttatus mgf014897m N 0.716
Si034417m.g Setaria italica Si034417m.g N 0.716
OGLUM03G30480 Oryza glumaepatula OGLUM03G30480 N 0.714
OBART03G30260 Oryza barthii OBART03G30260 N 0.714
OPUNC03G27510 Oryza punctata OPUNC03G27510 N 0.714
ORGLA03G0287000 Oryza glaberrima ORGLA03G0287000 N 0.714
OMERI03G26460 Oryza meridionalis OMERI03G26460 N 0.714
ONIVA03G31510 Oryza nivara ONIVA03G31510 N 0.714
OS03G0690600 Oryza sativa OS03G0690600 N 0.711
BGIOSGA010017 Oryza indica BGIOSGA010017 N 0.711
LPERR03G24920 Leersia perrieri LPERR03G24920 N 0.711
Lus10023404.g Linum usitatissimum Lus10023404.g N 0.711
SapurV1A.0451s0060 Salix purpurea SapurV1A.0451s0060 N 0.708
POPTR_0008s05750 Populus trichocarpa POPTR_0008s05750 N 0.705
cassava15723.m1 Manihot esculenta cassava15723.m1 N 0.705
fgenesh1_pg.C_scaffold_4001851 Arabidopsis lyrata fgenesh1_pg.C_scaffold_4001851 N 0.705
PGSC0003DMG400006352 Solanum tuberosum PGSC0003DMG400006352 N 0.705
OLONG_013585 Oryza longistaminata OLONG_013585 N 0.705
OB03G37330 Oryza brachyantha OB03G37330 N 0.705
Eucgr.G02939 Eucalyptus grandis Eucgr.G02939 N 0.703
Pavir.J32327 Panicum virgatum Pavir.J32327 N 0.703
VIT_13s0019g01700 Vitis vinifera VIT_13s0019g01700 N 0.702
AMTR_s00012p00239560 Amborella trichopoda AMTR_s00012p00239560 N 0.700
Pavir.Ia03770 Panicum virgatum Pavir.Ia03770 N 0.700