orange1.1g008153m.g (Citrus sinensis)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 orange1.1g008153m.g T202929_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g008153m GRAS 206 568

Links

Other GRAS family TFs
Other Citrus sinensis TFs

97 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Ciclev10011367m.g Citrus clementina Ciclev10011367m.g N 0.992
Pm014329 Prunus mume Pm014329 I 0.883
POPTR_0005s14540 Populus trichocarpa POPTR_0005s14540 I 0.881
MDP0000669451 Malus domestica MDP0000669451 I 0.881
POPTR_0004s08890 Populus trichocarpa POPTR_0004s08890 I 0.878
PRUPE_ppa003206mg Prunus persica PRUPE_ppa003206mg I 0.875
cassava6237.valid.m1 Manihot esculenta cassava6237.valid.m1 I 0.869
VIT_14s0006g00640 Vitis vinifera VIT_14s0006g00640 I 0.867
28677.m000055 Ricinus communis 28677.m000055 N 0.864
Eucgr.J01594 Eucalyptus grandis Eucgr.J01594 I 0.862
evm.TU.supercontig_116.43 Carica papaya evm.TU.supercontig_116.43 I 0.853
Gorai.001G089400 Gossypium raimondii Gorai.001G089400 I 0.842
TCM_019165 Theobroma cacao TCM_019165 N 0.836
Lus10033583.g Linum usitatissimum Lus10033583.g N 0.827
SapurV1A.0102s0220 Salix purpurea SapurV1A.0102s0220 N 0.825
Lus10017626.g Linum usitatissimum Lus10017626.g N 0.825
PGSC0003DMG400015692 Solanum tuberosum PGSC0003DMG400015692 N 0.822
Solyc11g011260.1 Solanum lycopersicum Solyc11g011260.1 N 0.822
LjT40K11.90.nc Lotus japonicus LjT40K11.90.nc N 0.819
LjT15P09.140.nc Lotus japonicus LjT15P09.140.nc N 0.819
GLYMA18G04500 Glycine max GLYMA18G04500 I 0.817
GLYMA11G33720 Glycine max GLYMA11G33720 I 0.814
cassava15077.m1 Manihot esculenta cassava15077.m1 N 0.811
MTR_3g065980 Medicago truncatula MTR_3g065980 N 0.808
Cla020062 Citrullus lanatus Cla020062 N 0.806
GAI1 Vitis vinifera VIT_01s0011g05260 N 0.803
29692.m000540 Ricinus communis 29692.m000540 N 0.803
AMTR_s00010p00148880 Amborella trichopoda AMTR_s00010p00148880 N 0.799
cassava14484.m1 Manihot esculenta cassava14484.m1 N 0.794
POPTR_0008s13090 Populus trichocarpa POPTR_0008s13090 N 0.792
PK14700.1 Cannabis sativa PK14700.1 N 0.789
evm.TU.supercontig_2.240 Carica papaya evm.TU.supercontig_2.240 I 0.789
Gorai.002G177000 Gossypium raimondii Gorai.002G177000 N 0.786
TCM_010965 Theobroma cacao TCM_010965 N 0.786
Cucsa.006260 Cucumis sativus Cucsa.006260 N 0.786
POPTR_0010s12080 Populus trichocarpa POPTR_0010s12080 N 0.786
Ca_13295 Cicer arietinum Ca_13295 I 0.786
SapurV1A.0405s0090 Salix purpurea SapurV1A.0405s0090 N 0.783
Cla003996 Citrullus lanatus Cla003996 N 0.776
SapurV1A.0015s0210 Salix purpurea SapurV1A.0015s0210 N 0.772
Pm006304 Prunus mume Pm006304 N 0.770
Cucsa.280310 Cucumis sativus Cucsa.280310 N 0.767
mgf008289m Mimulus guttatus mgf008289m N 0.764
Thhalv10005482m.g Eutrema salsugineum Thhalv10005482m.g N 0.763
Eucgr.G02163 Eucalyptus grandis Eucgr.G02163 N 0.758
Bostr.7903s0021 Boechera stricta Bostr.7903s0021 N 0.758
Aquca_091_00032 Aquilegia coerulea Aquca_091_00032 N 0.758
Cagra.2235s0013 Capsella grandiflora Cagra.2235s0013 N 0.758
PRUPE_ppa005944mg Prunus persica PRUPE_ppa005944mg N 0.758
Ca_05046 Cicer arietinum Ca_05046 N 0.756
RGA1 Arabidopsis lyrata fgenesh2_kg.5__65__AT2G01570.1 N 0.753
RGA Arabidopsis thaliana AT2G01570 N 0.753
Bra024875 Brassica rapa Bra024875 N 0.750
Bo7g078550 Brassica oleracea Bo7g078550 N 0.750
Cagra.3501s0003 Capsella grandiflora Cagra.3501s0003 N 0.744
GLYMA05G27190 Glycine max GLYMA05G27190 N 0.744
Carubv10008833m.g Capsella rubella Carubv10008833m.g N 0.744
Thhalv10007323m.g Eutrema salsugineum Thhalv10007323m.g N 0.739
GLYMA08G10140 Glycine max GLYMA08G10140 N 0.739
MDP0000237978 Malus domestica MDP0000237978 N 0.739
GAI Arabidopsis lyrata fgenesh2_kg.1__1634__AT1G14920.1 N 0.739
GAI Arabidopsis thaliana AT1G14920 N 0.739
Ciclev10017466m.g Citrus clementina Ciclev10017466m.g N 0.738
orange1.1g043131m.g Citrus sinensis orange1.1g043131m.g N 0.736
Bostr.7128s0107 Boechera stricta Bostr.7128s0107 N 0.736
Si039400m.g Setaria italica Si039400m.g N 0.736
Aquca_002_01300 Aquilegia coerulea Aquca_002_01300 N 0.733
Pavir.Ia00840 Panicum virgatum Pavir.Ia00840 N 0.731
Pavir.Ib04357 Panicum virgatum Pavir.Ib04357 N 0.731
Carubv10020171m.g Capsella rubella Carubv10020171m.g N 0.729
LPERR03G26000 Leersia perrieri LPERR03G26000 N 0.728
ONIVA03G32670 Oryza nivara ONIVA03G32670 N 0.728
OBART03G31370 Oryza barthii OBART03G31370 N 0.728
MLOC_67940 Hordeum vulgare MLOC_67940 N 0.728
ORGLA03G0290200 Oryza glaberrima ORGLA03G0290200 N 0.728
OMERI03G27970 Oryza meridionalis OMERI03G27970 N 0.728
OB03G38380 Oryza brachyantha OB03G38380 N 0.728
SLR1 Oryza sativa OS03G0707600 N 0.728
SLR1 Oryza indica BGIOSGA013420 N 0.728
BRADI1G11090 Brachypodium distachyon BRADI1G11090 N 0.725
GRMZM2G024973 Zea mays GRMZM2G024973 N 0.725
RGL2 Arabidopsis lyrata fgenesh2_kg.3__292__AT3G03450.1 I 0.725
Carubv10018534m.g Capsella rubella Carubv10018534m.g N 0.725
OGLUM03G31610 Oryza glumaepatula OGLUM03G31610 N 0.724
OPUNC03G28530 Oryza punctata OPUNC03G28530 N 0.724
Traes_4DS_ADBA6E30A Triticum aestivum Traes_4DS_ADBA6E30A N 0.724
GRMZM2G144744 Zea mays GRMZM2G144744 N 0.722
Traes_4BS_2EE4988CD Triticum aestivum Traes_4BS_2EE4988CD N 0.722
ORUFI03G32650 Oryza rufipogon ORUFI03G32650 N 0.721
Sb01g010660 Sorghum bicolor Sb01g010660 N 0.719
RGL1 Arabidopsis lyrata fgenesh2_kg.2__868__AT1G66350.1 N 0.719
Cagra.0463s0002 Capsella grandiflora Cagra.0463s0002 N 0.714
RGL1 Arabidopsis thaliana AT1G66350 N 0.703
Thhalv10018436m.g Eutrema salsugineum Thhalv10018436m.g N 0.703
SapurV1A.0230s0190 Salix purpurea SapurV1A.0230s0190 N 0.703
mgf025772m Mimulus guttatus mgf025772m N 0.703
Bostr.26959s0284 Boechera stricta Bostr.26959s0284 N 0.700