Pavir.Bb02923 (Panicum virgatum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Pavir.Bb02923 T202974_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Bb02923.1.p GRAS 198 569

Links

Other GRAS family TFs
Other Panicum virgatum TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Pavir.J35699 Panicum virgatum Pavir.J35699 N 0.981
Si029156m.g Setaria italica Si029156m.g N 0.976
GRMZM5G821439 Zea mays GRMZM5G821439 N 0.954
Sb02g035680 Sorghum bicolor Sb02g035680 N 0.951
OPUNC07G16570 Oryza punctata OPUNC07G16570 N 0.927
OB07G23640 Oryza brachyantha OB07G23640 N 0.924
MLOC_37712 Hordeum vulgare MLOC_37712 N 0.921
OGLUM07G17420 Oryza glumaepatula OGLUM07G17420 N 0.914
OLONG_024541 Oryza longistaminata OLONG_024541 N 0.914
ONIVA07G16090 Oryza nivara ONIVA07G16090 N 0.914
ORUFI07G18480 Oryza rufipogon ORUFI07G18480 N 0.914
BGIOSGA025902 Oryza indica BGIOSGA025902 N 0.914
Traes_2BS_4600D4B54 Triticum aestivum Traes_2BS_4600D4B54 N 0.914
TRIUR3_35245 Triticum urartu TRIUR3_35245 N 0.911
BRADI1G25370 Brachypodium distachyon BRADI1G25370 N 0.911
CIGR1 Oryza sativa OS07G0545800 N 0.911
OMERI07G14660 Oryza meridionalis OMERI07G14660 N 0.911
ORGLA07G0142600 Oryza glaberrima ORGLA07G0142600 N 0.911
OBART07G17780 Oryza barthii OBART07G17780 N 0.911
Traes_2DS_2D035BAFD Triticum aestivum Traes_2DS_2D035BAFD N 0.908
F775_07373 Aegilops tauschii F775_07373 N 0.908
Traes_2AS_620B821281 Triticum aestivum Traes_2AS_620B821281 N 0.905
GSMUA_Achr6G24310_001 Musa acuminata GSMUA_Achr6G24310_001 N 0.792
VIT_19s0014g04940 Vitis vinifera VIT_19s0014g04940 N 0.778
PRUPE_ppa003323mg Prunus persica PRUPE_ppa003323mg N 0.773
gene03285-v1.0-hybrid Fragaria vesca gene03285-v1.0-hybrid N 0.772
GLYMA13G36120 Glycine max GLYMA13G36120 N 0.762
Pm029452 Prunus mume Pm029452 N 0.762
PK07026.1 Cannabis sativa PK07026.1 N 0.762
LPERR07G15240 Leersia perrieri LPERR07G15240 N 0.761
GLYMA06G41500 Glycine max GLYMA06G41500 N 0.759
TCM_031132 Theobroma cacao TCM_031132 N 0.757
MDP0000205622 Malus domestica MDP0000205622 N 0.754
GLYMA12G34420 Glycine max GLYMA12G34420 N 0.754
Gorai.002G080600 Gossypium raimondii Gorai.002G080600 N 0.751
Gorai.013G164700 Gossypium raimondii Gorai.013G164700 N 0.751
cassava24578.valid.m1 Manihot esculenta cassava24578.valid.m1 N 0.749
SapurV1A.3085s0020 Salix purpurea SapurV1A.3085s0020 N 0.748
mgf007614m Mimulus guttatus mgf007614m N 0.746
Ca_06943 Cicer arietinum Ca_06943 N 0.746
Cucsa.053270 Cucumis sativus Cucsa.053270 N 0.746
POPTR_0011s13460 Populus trichocarpa POPTR_0011s13460 N 0.746
GLYMA12G16750 Glycine max GLYMA12G16750 N 0.745
MTR_2g082090 Medicago truncatula MTR_2g082090 N 0.743
Eucgr.F03414 Eucalyptus grandis Eucgr.F03414 N 0.743
POPTR_0001s44090 Populus trichocarpa POPTR_0001s44090 N 0.741
AMTR_s00043p00136400 Amborella trichopoda AMTR_s00043p00136400 N 0.741
Solyc07g063940.1 Solanum lycopersicum Solyc07g063940.1 N 0.735
PGSC0003DMG400019232 Solanum tuberosum PGSC0003DMG400019232 N 0.735
Lus10035840.g Linum usitatissimum Lus10035840.g N 0.732
Solyc12g005340.1 Solanum lycopersicum Solyc12g005340.1 N 0.729
Ciclev10007843m.g Citrus clementina Ciclev10007843m.g N 0.727
PGSC0003DMG400021802 Solanum tuberosum PGSC0003DMG400021802 N 0.724
Aquca_005_00404 Aquilegia coerulea Aquca_005_00404 N 0.724
Gorai.009G427800 Gossypium raimondii Gorai.009G427800 N 0.724
SapurV1A.0327s0070 Salix purpurea SapurV1A.0327s0070 N 0.721
Lus10036623.g Linum usitatissimum Lus10036623.g N 0.716
orange1.1g040563m.g Citrus sinensis orange1.1g040563m.g N 0.708