CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ib04357
(
Panicum virgatum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Pavir.Ib04357
T203036_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ib04357.1.p
GRAS
221
599
LVHALLACAEAVQQENFTAAEALVKQIPMLASSQGGAMRKVAAYFGEALARRVYRFRPAPDSSLLDAAFADLLHAHFYESCPYLKFAHFTANQAILEAFAGCRRVHVVDFGIKQGMQWPALLQALALRPGGPPSFRLTGVGPPQPDETDALQQVGWKLAQFAHTIRVDFQYRGLVAATLADLEPFMLQPDGEDTDDEPEVIAVNSVFELHRLLAQPGALEKVLGTVRAVRPRIVTVVEQEANHNSGSFLDRFTESLHYYSTMFDSLEGAGAGQSADAAPAAAGGTDQVMSEVYLGRQICNVVACEGAERTERHETLGQWRNRLGRAGFEPVHLGSNAYKQASTLLALFAGGDGYRVEEKDGCLTLGWHTRPLIATSAWR
Links
Other
GRAS
family TFs
Other
Panicum virgatum
TFs
76 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000005011
Ailuropoda melanoleuca
ENSAMEG00000005011
N
0.000
ENSBTAP00000010078-D1
Bos grunniens
ENSBTAP00000010078-D1
N
0.000
ENSCPOG00000027253
Cavia porcellus
ENSCPOG00000027253
N
0.000
ENSCSAG00000007968
Chlorocebus sabaeus
ENSCSAG00000007968
N
0.000
ENSMPUG00000007231
Mustela putorius furo
ENSMPUG00000007231
N
0.000
ENSNLEG00000001897
Nomascus leucogenys
ENSNLEG00000001897
N
0.000
ENSOARG00000004095
Ovis aries
ENSOARG00000004095
N
0.000
ENSP00000377504
Macaca fascicularis
ENSP00000377504
N
0.000
ENSPANG00000000284
Papio anubis
ENSPANG00000000284
N
0.000
ENSPPYG00000009508
Pongo abelii
ENSPPYG00000009508
N
0.000
ENSSTOG00000028879
Ictidomys tridecemlineatus
ENSSTOG00000028879
N
0.000
Myotis_brandtii_ZNF414_10012537
Myotis brandtii
Myotis_brandtii_ZNF414_10012537
N
0.000
Zfp414
Mus musculus
ENSMUSG00000073423
N
0.000
Zfp414
Rattus norvegicus
ENSRNOG00000008378
N
0.000
ZNF414
Bos taurus
ENSBTAG00000007660
N
0.000
ZNF414
Canis familiaris
ENSCAFG00000018529
N
0.000
ZNF414
Tursiops truncatus
ENSTTRG00000009785
N
0.000
ZNF414
Tupaia belangeri
ENSTBEG00000004008
N
0.000
ZNF414
Dasypus novemcinctus
ENSDNOG00000025224
N
0.000
ZNF414
Pteropus vampyrus
ENSPVAG00000009654
N
0.000
ZNF414
Equus caballus
ENSECAG00000023401
N
0.000
ZNF414
Echinops telfairi
ENSETEG00000019716
N
0.000
ZNF414
Otolemur garnettii
ENSOGAG00000003243
N
0.000
ZNF414
Oryctolagus cuniculus
ENSOCUG00000027412
N
0.000
ZNF414
Felis catus
ENSFCAG00000015220
N
0.000
ZNF414
Homo sapiens
ENSG00000133250
N
0.000
ZNF414
Gorilla gorilla
ENSGGOG00000003514
N
0.000
ZNF414
Loxodonta africana
ENSLAFG00000021907
N
0.000
ZNF414
Macaca mulatta
ENSMMUG00000019918
N
0.000
ZNF414
Myotis lucifugus
ENSMLUG00000006742
N
0.000