Pavir.J01797 (Panicum virgatum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Pavir.J01797 T203037_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J01797.1.p GRAS 192 562

Links

Other GRAS family TFs
Other Panicum virgatum TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.J36240 Panicum virgatum Pavir.J36240 N 0.970
Si021635m.g Setaria italica Si021635m.g N 0.962
Sb09g020850 Sorghum bicolor Sb09g020850 N 0.921
GRMZM2G153333 Zea mays GRMZM2G153333 N 0.911
OGLUM01G43650 Oryza glumaepatula OGLUM01G43650 N 0.846
OMERI01G36330 Oryza meridionalis OMERI01G36330 N 0.846
OBART01G39420 Oryza barthii OBART01G39420 N 0.846
ORGLA01G0333300 Oryza glaberrima ORGLA01G0333300 N 0.846
OLONG_003002 Oryza longistaminata OLONG_003002 N 0.843
OPUNC01G38160 Oryza punctata OPUNC01G38160 N 0.843
ONIVA01G44280 Oryza nivara ONIVA01G44280 N 0.843
ORUFI01G42800 Oryza rufipogon ORUFI01G42800 N 0.843
Sb03g041760 Sorghum bicolor Sb03g041760 N 0.840
Si000832m.g Setaria italica Si000832m.g N 0.840
OS01G0881500 Oryza sativa OS01G0881500 N 0.840
LPERR01G33950 Leersia perrieri LPERR01G33950 N 0.837
OB01G48180 Oryza brachyantha OB01G48180 N 0.835
BRADI2G56910 Brachypodium distachyon BRADI2G56910 N 0.832
Pavir.Ea03635 Panicum virgatum Pavir.Ea03635 N 0.832
Pavir.J20385 Panicum virgatum Pavir.J20385 N 0.832
BGIOSGA000383 Oryza indica BGIOSGA000383 N 0.827
Traes_3DL_BF7D83705 Triticum aestivum Traes_3DL_BF7D83705 N 0.817
F775_25916 Aegilops tauschii F775_25916 N 0.816
Traes_3AL_6E16C8167 Triticum aestivum Traes_3AL_6E16C8167 N 0.816
TRIUR3_26381 Triticum urartu TRIUR3_26381 N 0.813
TRAES3BF021600230CFD_g Triticum aestivum TRAES3BF021600230CFD_g N 0.810
MLOC_6971 Hordeum vulgare MLOC_6971 N 0.810
chr1.CM0982.460.nd Lotus japonicus chr1.CM0982.460.nd N 0.733
GSMUA_Achr10G17290_001 Musa acuminata GSMUA_Achr10G17290_001 N 0.726
GSMUA_Achr3G02410_001 Musa acuminata GSMUA_Achr3G02410_001 N 0.713
PDK_20s1392371g003 Phoenix dactylifera PDK_20s1392371g003 N 0.712
Ca_13101 Cicer arietinum Ca_13101 N 0.702